| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6124 |
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| Symbol | |
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| ID | 6247689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 676639 |
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| End bp | 678783 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642597825 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001862227 |
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| Protein GI | 186470909 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.029227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.478766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAT TTCTGACAAA CCGTACATTG ACGATTGACG GTCCTGCCAT CCCCCTTTCG
TCCACTGGCG ATCCAGTGCT GCAACTTCAG TCGATCGCGG GTACAGAAAT TCTCTCCAGG
ATCTACAGGT ATGTGCTGGA TTGCGTCACT GTCTCTGATC TGTTGATGAC CGATGCTGCC
AGCCTCGATC TGAAATCGAT GATCGGCAAG GAGTTGACCG TCACGGTGCA GCTGGATGGC
ATGGGTTCCT TCGTGCCGGG AATGACGGGA CTGTCTGGTG CCGCCAATAT CGGCAAAGGC
ATCCGGGAGA TCAGCGGCAT TGTTACGGAA GCACGATTTG TCGGTCAGTC AAACCGACAG
GGCCACTATC GTCTGCTCCT CCAGCCGTGG ATCACGCTTG CGGATCAGCA ATCGACTTAC
AGAATTTTCC AGAATAAGAC GGTCGTCGAA ATCGTCGATC AGGTATTTGG TTCCTACATG
TTCTCCTGGG ACAAGCGCCT GAGTGCAGAA TACAAGGAAC TCGAATACCA GGTCCAGTAT
GGTGAAACGG ACTTTATATT TGCCCAGAGG CTCATGCAGG AGCATGGCAT TTACTGGTTC
TTTGAGCACT CTAACAAGAT CCACCGGATG GTTCTTGTCG ATCAGCTTGG TGCCCACAAG
CCGGTTGATA GTGCAGCATA TCAGACTCTG CAGTATTACC CGCCCGGCCA CAAGATCGAT
ATGGAATATA TTGACAGCTT CGACGCGAGC GAAAGCATTC AGTCGGGTCG GTGGACAACG
AGCGACTTCA ATTTCAAGAA GCCGAGGGCA CGACTCGGAA CCGAAAACGC GTTGCCGCGT
GATACCGAGT TCAATGAACT GGAACGCTAC GAATGGCCGG GCGACTATAG CGACACAGCC
GTCGGAGAAG ACTTCGCGCG GATACGAATG CAGGAGCTTT ACGCGCCAGG CACTCGTGCT
TGGGGGAGTG GCAATCTGCG CGACGTGGTT TGTGGCACAA CGTTCACGCT CGCAGGCTAC
CCGCAGCAAA GTGCAAATTG CGAGTACCTG GTTGTCAGCG CATCGTTTGC AGCTTCGGAG
CTGGGTGAAT CCACTGGTGC GGGTGAGTTC AGTGTCCGCT CGTCGTTCGT CGTGCAACCG
GCGACCGTCG TTTTCCGTCC TCCGCGCACT GTTCCGAAAC CCCGCACGAC TGGGCCTCAA
ACCGCCATCG TCACTGGGCC GGATGGACAG GAAATCTGGA CTGACCAGTA TGGCCGCGTC
AAGTTGAAAT TCCACTGGGA TCGCTCGCCC GTGCGCAACC AGAAATCATC CTGCTGGGTA
CGTGTCGCGT ATCCGTGGGC GGGGAACAAC TTCGGCACGA TCAACATTCC CCGCATCGGG
CAGGAAGTCA TTGTGGACTT CGAGAACGGA GATCCCGATC GGCCGATCGT GACGGGGCGC
GTCTATAACG GCGCGAATAT GCCGCCGTGG CCGCTTCCTG ATAATGCCAC ACAAAGCGGG
ACGCTGTCAC GTTCGGAAGA CGGTAACTAC GAGACGGCGA ACGCGATCCG CTTTGAGGAC
AAAAAGGGAC GCGAAGAGGT ATGGATTCAC GCTGAAAAGG ACATGCGCAC CGAGGTGGAA
AACGACGAGG TGCACGCGGT GGAACATGAC CAGACCATTA CGATAAACCA CGACCACACA
AAGCACGTGG GCAACGATGA ACAGGTCGAT ATCGGTCACG ACCGCACCCA CCGCATTACC
CAGGACGACT CGCTTGCTGT CGGCCGCAGT CTCACCCTGA CGGTGAGCAA GGACTACACC
GGCAACGTTG GTAACAATCG CACCGAGAAA GTCGCCGCCG ACTACCAGAT CCAGACCGGT
GGAAACGTTC AGCACACGGT GCAGGGGCGC CACCAGCTTC AGGCTGGACA AGGCATCGCT
CGCAAGACCC AGGTCTATGA ACTGGTGGCG GGAGAGCGGC TTGTTCTGAA GGCACCTGGC
GGTAGCCTCA CCATCGACAG CTCGGGTATT ACCCTGAACG GCATCTCCAT CCATCTCAAG
GGCGCGGTGA CCCAGGAGAA CGGAACGGGC GGGGCACCAA CCCTTAATGG CATTCCGGTG
CCAGCGCAGT TGCCTGATCC GACCCATCTG CCGCTGTCTG ACTAA
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| Protein sequence | MLQFLTNRTL TIDGPAIPLS STGDPVLQLQ SIAGTEILSR IYRYVLDCVT VSDLLMTDAA
SLDLKSMIGK ELTVTVQLDG MGSFVPGMTG LSGAANIGKG IREISGIVTE ARFVGQSNRQ
GHYRLLLQPW ITLADQQSTY RIFQNKTVVE IVDQVFGSYM FSWDKRLSAE YKELEYQVQY
GETDFIFAQR LMQEHGIYWF FEHSNKIHRM VLVDQLGAHK PVDSAAYQTL QYYPPGHKID
MEYIDSFDAS ESIQSGRWTT SDFNFKKPRA RLGTENALPR DTEFNELERY EWPGDYSDTA
VGEDFARIRM QELYAPGTRA WGSGNLRDVV CGTTFTLAGY PQQSANCEYL VVSASFAASE
LGESTGAGEF SVRSSFVVQP ATVVFRPPRT VPKPRTTGPQ TAIVTGPDGQ EIWTDQYGRV
KLKFHWDRSP VRNQKSSCWV RVAYPWAGNN FGTINIPRIG QEVIVDFENG DPDRPIVTGR
VYNGANMPPW PLPDNATQSG TLSRSEDGNY ETANAIRFED KKGREEVWIH AEKDMRTEVE
NDEVHAVEHD QTITINHDHT KHVGNDEQVD IGHDRTHRIT QDDSLAVGRS LTLTVSKDYT
GNVGNNRTEK VAADYQIQTG GNVQHTVQGR HQLQAGQGIA RKTQVYELVA GERLVLKAPG
GSLTIDSSGI TLNGISIHLK GAVTQENGTG GAPTLNGIPV PAQLPDPTHL PLSD
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