| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6120 |
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| Symbol | |
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| ID | 6247685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 672949 |
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| End bp | 674037 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597821 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001862223 |
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| Protein GI | 186470905 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.677953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.349005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTG CTCCGTTCAA GGCGCTGATC CAGGATATCG CGCTGTCGCA ATCGCTGCTC
GACCACCTGC AGGCCGAGCC GTGGCGCCAT GGCTTTTTTG CGTTGATGCG CCGTATCGGC
GCCAACCCGG CGATTGACCC GATCGGTACG GCCAGGCTCC CGCAGGCTGA GCCCTTCAGG
CTCGGCCAGC AGGCGAGCCT CATCTTTGCG CCGCGCGAGA TCGCAAGTGT CAGCGTGGAT
CACGAGCGTC TGAGAGTCCT GCTCTTTGGA CTGGGCATGC TTGGTCCCAA TGGCCCACTG
CCGATCCACA TCACCGAGAT TGCACGCGAA CGCAAGGAGC ATCGACGCGA TCCGACGCTC
AGCAATTTCC TCGACATCTT CCATCATCGA TATCTCACGA TGCTCTACCG CGTGTGGGCG
TCGGCGCAAT CCGCAGCGAG TCTGGATCGG CCCGGGAACG AGCGGTTCAC GTTCTACATT
GCCAGCCTGA CAGGGCACGA GGTCAAGGAG ATTGAGCAGG GACCGTTGCC GGCCCACGCG
AGGCTCTCCG CCGCGCCACA CCTGATCCGC GAATCACGCA ACCCGGACGG GCTGGCTGCC
ACGCTCTCCC ACTATTTCGG GGTACCGGTC AAGATCGATG AGTTCGTCTT TCACTGGCTT
GAACGCAAGC CCGGCAAACG CAGCAGGCTG GGGGTACCCG GAGCCGCCAC GACGATGGCC
GTCGATGGCT TTCTGGGAGA CAGGATACCG GATCGTCAGT ACCGGTTCCG CATCGTCATT
GGCCCCGTTG ACATGGAAGA CTATCAGCGG TTCACGCCGC AGGGCTCCGA TCTGCTGCGC
CTGGTTGAAT GGGTACGCGC GTTTGTTGGT CAGGAAATCC ACTGGGAACT GGAACTGAAG
ATTCGCCCGC ACAGCGCACC ACCGGCTGTC GTGGGCGGTC CCCAGCAGCT GGGCTGGTCC
GGGTGGCTCG GACAGTCTCC GTCACCTGAA CCTGTCACCG GGATGATTTT TGAGCCCGAG
CGCTACGTTC CCCAGCTCAA ACAGGATGCC GAAACCCGCG CGGCCAGAGT GAAGCAGATC
GAACCATGA
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| Protein sequence | MQRAPFKALI QDIALSQSLL DHLQAEPWRH GFFALMRRIG ANPAIDPIGT ARLPQAEPFR
LGQQASLIFA PREIASVSVD HERLRVLLFG LGMLGPNGPL PIHITEIARE RKEHRRDPTL
SNFLDIFHHR YLTMLYRVWA SAQSAASLDR PGNERFTFYI ASLTGHEVKE IEQGPLPAHA
RLSAAPHLIR ESRNPDGLAA TLSHYFGVPV KIDEFVFHWL ERKPGKRSRL GVPGAATTMA
VDGFLGDRIP DRQYRFRIVI GPVDMEDYQR FTPQGSDLLR LVEWVRAFVG QEIHWELELK
IRPHSAPPAV VGGPQQLGWS GWLGQSPSPE PVTGMIFEPE RYVPQLKQDA ETRAARVKQI
EP
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