| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6119 |
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| Symbol | |
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| ID | 6247684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 671060 |
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| End bp | 672949 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642597820 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001862222 |
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| Protein GI | 186470904 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.129675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.405706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAC GACTGCTCGA ATATTACAAC CACGAATTGA TCTATATGCG GGAGCTTGCC
AGCGAATTCG GCCGGCACCA CCCCAAGATC GGGGCGCGTC TGGGCATGCA GGCGGGTGAG
ATCGGCGACC CCTATGTCGA ACGGCTCCTC GAGTCGTTCT GCTTCATGGC GGCCCGTATG
CAGATCAAGA TCGACGCGGA GTTCCCGAAG TTTACCGGGC GGCTCCTTGA AGTCATCTAC
CCGAACTATG TCGCGCCGAC TCCATCCATA TCGGTCGCCC GCATCTATCC CAGTCCGAAG
GAAGGGAACC TGAACCGCGG TTTCCAGCTG CCACGTGGCA CGATGTTCAA GGCACGCAAG
CCAGCGGGCG AGAAAACCCT GTGCCAGTTC CGCAGCGGGC TGGACGTCAC GCTGTATCCG
CTCGGCATTT CCGAAGCGAA ACTCACGGCC ATTCCACCCG ATGTTGTCGG ACTCGACCGG
TATATTCCGC CGGATCGCCA GGTCCGGGGC GCCTTGCGCA TCCGGTTCCG TACCACGAAC
GGTTCGCGAA TTTCGGATCT GCAGGGCCTC AACCATTTGC CAATCTACCT TGCAGGTGAC
GAGCAGGTCG CTTCGCACCT GTTCGAACTG CTGCACGCGG CCAATGTGGC TCTGGTCATT
GGTGAACCAG GGCAGTTCGG TTCGGGCGAC AAGCCGCTCT CGGTCGTCAC GTCGAATCCT
GTTGCCCATG AGGGTATTGG TATTGGTGAA GGGCTGCTGC CGCTCACCTG GTCGAAATTC
CATGGCCACA ATCTTCTGCA CGAGTACTTT GCGTGCCCGA GCCGGTTCTA TTTCTTTGCG
CTGACGGGTC TCGCGCAAGG ATTTAGCCGG ATCAACGGGC CCGAAGTCGA GGTGATTGTG
CTGCTGGATC AACCCACCGA ACGGCTCGCG AACCTGGTGG ATGCGTCGCG TTTTGCACTT
TTTTGCACTC CGGTCGTCAA TCTGTTCGAG AAGCGGACCG ACCAGATCGA AATCCCGCAG
GGCGAGTCCG AGGTCCGGCT CGTTCCATCG AAGCTGGAGC CGCTTGACTA TGAGGTCTTC
GCGATCCAGA AGCTGTGCGG CCAGAAGACG TCGAATTCGG CTGAACTGGA GTTCCGGCCG
CTGTTCCAGA CGCTGAACAA CGACGAGGGC AATTACGGGC GGTACTTTTC GAGCCGCCGC
GAGCGCCGCC TGGCGTCGGA CAACAGTCGG CGATACGGCA CGCGCACGCC CTACATCGGT
ACTGAGATGT TCGTCACGCT GGTCGACCAG ACCGAAGCGC CCTACAACGG GGACATCCGC
TATCTGTCGG CCGATGCCTG GGTGACCAAC CGCGACCTGC CACTGCTCGT GCCTCGCAAC
GGCGTGGATG ACCTCGACGG CAACGACGAG GACTCGATCC AGTCGATCGG TCTGATCCGG
CCACCCAGCC CTCCGCGGCC GCCTTACGCG GAACGCGAGA TGGCTTGGCG CCTGATCCGG
CAACTGAACT TCAACTACCT GCCGTTCAGT GACATGGATC ACCGCGAGGG TGGGCAGGGC
CTGCGCGATC TGCTCAGACT GTTCCTTGCC AGCGATGATA CCGAACGCCA GCGTCAGGTC
GAAGCTCTCA TTGGCGTGAA GACGGAACCC GTCAACGACA TGCTGCCGGG CAACGGTCCA
CTCGTGTTCG GGCGTGGTAT CGAGTGCGTG CTCACGGTCG ATGAGACGGG CTTCTCGGGC
GTCAGCCCCT ACCTGCTCGG CCTGATTCTC GAACACTACA TGGCCCGGCA CGTGTCGATC
AATTCGTTCA CGCAAACCGA GCTGCATTCA ATGCAACGGG GGTTGGTCGC CCGTTGGCCG
GTACGCATGG GTACGCGTGG AGTGGCCTGA
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| Protein sequence | MDPRLLEYYN HELIYMRELA SEFGRHHPKI GARLGMQAGE IGDPYVERLL ESFCFMAARM
QIKIDAEFPK FTGRLLEVIY PNYVAPTPSI SVARIYPSPK EGNLNRGFQL PRGTMFKARK
PAGEKTLCQF RSGLDVTLYP LGISEAKLTA IPPDVVGLDR YIPPDRQVRG ALRIRFRTTN
GSRISDLQGL NHLPIYLAGD EQVASHLFEL LHAANVALVI GEPGQFGSGD KPLSVVTSNP
VAHEGIGIGE GLLPLTWSKF HGHNLLHEYF ACPSRFYFFA LTGLAQGFSR INGPEVEVIV
LLDQPTERLA NLVDASRFAL FCTPVVNLFE KRTDQIEIPQ GESEVRLVPS KLEPLDYEVF
AIQKLCGQKT SNSAELEFRP LFQTLNNDEG NYGRYFSSRR ERRLASDNSR RYGTRTPYIG
TEMFVTLVDQ TEAPYNGDIR YLSADAWVTN RDLPLLVPRN GVDDLDGNDE DSIQSIGLIR
PPSPPRPPYA EREMAWRLIR QLNFNYLPFS DMDHREGGQG LRDLLRLFLA SDDTERQRQV
EALIGVKTEP VNDMLPGNGP LVFGRGIECV LTVDETGFSG VSPYLLGLIL EHYMARHVSI
NSFTQTELHS MQRGLVARWP VRMGTRGVA
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