| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6082 |
|---|
| Symbol | |
|---|
| ID | 6247649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 625781 |
|---|
| End bp | 626671 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642597785 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001862187 |
|---|
| Protein GI | 186470869 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.201741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGA TCGGTTCTTC GCGCCCCAGC GTAGAGGGAC GCTTGTCGGG TGCGCATCGT
GGCAACGCAT ACGCCGGCGC GGCCCGCCCA CGTAAGCGCA AGGCCAATCG CGGCATGCCC
GGCGAAGGGC CGACCGCCGC GCTCAGCACG TTGTGCGTCG CGGCGTTGCT GCTGATGTGG
TGGGCCTTAT CGCATTTCGG CTGGGTGCCG CCGCTGTTTC TGCCGTCGCC GGACGCCGTC
CGGCGCGCAT TCGCCGACGC ATGGAACGGC CGCATTCAGG GCGGCTTGCC GTTGTCGGAA
CACTTGATGT GGAGCGCGAT CCGCGTGTTC GGCGCGTTTG CGCTCGCCTG CGTGACGGCC
GTGCCGATCG GCGTGTTGAT GGGCGTGAGC CGGGTTGCGC GCGGCCTGCT CGATCCGCCC
ATCGAGTTCT ACCGGCCGCT GCCGCCGCTC GCGTATCTGC CGCTGGTGGT GATCTGGTTC
GGCATCGATG AAACGGCGAA GCTCGTCGTC ATCTGGCTCG CCTGCTTTGC GCCGATTGCG
ATGGCCGCGC GCGCGGGCGT GCGCAGCGCG GCCGTCGAGC AGATCAATGC CGCGTGGTCG
CTCGGTGCGA ACTTCAGGCA GGTCGTGCTG CACGTCGTGC TGCCCGCTGC GTCGCCGGAG
ATTCTCACCG GGCTGCGCAT CGCGATCGGC TTCGGCTGGA CCACGCTTGT CGCCGCCGAG
ATGGTCGCGG CGACGGCGGG GCTGGGACAG ATGGTGCTCA ACGCGTCGAG CTTTCTGCGC
ACCGATGTCG TCGTGATGGG CATCGTGCTG ATCGGCGCGA TTGCGTGGCT GTTCGATCTC
GGCATGCGCG TGCTGGAGCG CAAGCTCGTG CCGTGGAAGG GCAAGCAGTA G
|
|---|
| Protein sequence | MNSIGSSRPS VEGRLSGAHR GNAYAGAARP RKRKANRGMP GEGPTAALST LCVAALLLMW
WALSHFGWVP PLFLPSPDAV RRAFADAWNG RIQGGLPLSE HLMWSAIRVF GAFALACVTA
VPIGVLMGVS RVARGLLDPP IEFYRPLPPL AYLPLVVIWF GIDETAKLVV IWLACFAPIA
MAARAGVRSA AVEQINAAWS LGANFRQVVL HVVLPAASPE ILTGLRIAIG FGWTTLVAAE
MVAATAGLGQ MVLNASSFLR TDVVVMGIVL IGAIAWLFDL GMRVLERKLV PWKGKQ
|
|---|
| |