| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6031 |
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| Symbol | |
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| ID | 6247601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 572350 |
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| End bp | 573501 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597737 |
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| Product | porin |
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| Protein accession | YP_001862139 |
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| Protein GI | 186470821 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00960697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0888656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTA ACAAAGCCAG CCAGAATGCC AACTCGAAAT CGCGCTTCAT GCTTGGGGCC
GTTGCGGCCG CGGGCGTGAG CCTGTCCTGC GGCGCCGCGC ATGCGCAAAG CAGCGTCACG
CTGTACGGCA TTGCGGACGT TGGCATCGAA CACATCAACA ACACGAGTGC TGGCGGCGCA
CAGACGCGCG AAGTGTCGGG CAACCTCTCG GGTTCGCGCT GGGGGCTGAA GGGCGTCGAA
GACCTCGGAG GCGGAATGAA GGCCATTTTC CAGCTGGAAA ACGGCTTCAA CATCAATGAC
GGCACGACCG CGCAATCGAC GAGAGGTCTG GGCGCCAATG CCGCCACGAC ATCGCGACTT
TTCGGCCGCC AGGCGTGGGT CGGTCTCTCG TACAAAGGTC AGCAGTTGAC CTTCGGCCGC
CAGAATTCGC TGCTCTACGA ACAGGCCGTC GCTTTTGACC CAATGGGTGC TTCGTCACGG
TACTCGGTGC TGTCGCTCGA TTACGCGATG GCCGCGCGCA TCGACAATTC GGCGAAATAC
ACGGGCGTGT TCGGTCCGGT GACGGCGCAG GCAATGTACA GCACGCGCTA CGACACGGGC
TACGGTGCAG AAGTGCCGGG TGCGGAAATC ACGGGACGCT TCTTCAGCGG CGCATTGACC
TTCGCGCAGG GTCCGCTCGC AGCGAGCGTC TCGTACGAGC AGCGTAACAG CAACACGGTC
GCGACCAACA CCGGCAGCGA GCGCCGTGCC ACCGCTGCGG CGTCATATGT GATCGGATCG
GTGAAGGGCT TCGCAGGTTA TCGCTATCTG CGCGCCTCGA ATGCATTCCT GCCTGCGAAT
CCGATCCGCG TCGCGAACGG CTCCGATGCG AGCGCGGCCA ATCTGTACTG GGCAGGCGCG
CAGTACTCGG TCACGCCTGC ATTCGTGCTC ACGGCGACAG CGTATTACCA GGACGTGCAT
TCGACGGGCG CCGATCCGTG GCTCGCCGTG CTGAGCGCGG ACTACCTGCT GTCGAAACGT
ACCGACGTCT ACGCAACTGC GGGCTTCGCG CACAACAAGG ACGGCTCGGC GCTCGGCGTA
AACGGCTACG GCACGGTCGC GCCAGGCTAC AACCAGACGG GCGTGGTCAT CGGCATGCGC
CAGAAGTTCT AA
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| Protein sequence | MSFNKASQNA NSKSRFMLGA VAAAGVSLSC GAAHAQSSVT LYGIADVGIE HINNTSAGGA
QTREVSGNLS GSRWGLKGVE DLGGGMKAIF QLENGFNIND GTTAQSTRGL GANAATTSRL
FGRQAWVGLS YKGQQLTFGR QNSLLYEQAV AFDPMGASSR YSVLSLDYAM AARIDNSAKY
TGVFGPVTAQ AMYSTRYDTG YGAEVPGAEI TGRFFSGALT FAQGPLAASV SYEQRNSNTV
ATNTGSERRA TAAASYVIGS VKGFAGYRYL RASNAFLPAN PIRVANGSDA SAANLYWAGA
QYSVTPAFVL TATAYYQDVH STGADPWLAV LSADYLLSKR TDVYATAGFA HNKDGSALGV
NGYGTVAPGY NQTGVVIGMR QKF
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