| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6025 |
|---|
| Symbol | |
|---|
| ID | 6247595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 566826 |
|---|
| End bp | 567269 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642597731 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_001862133 |
|---|
| Protein GI | 186470815 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.212804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.49233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TCCTCATGCT TCACGGCATC AATCACAACA TGTTCGGTAA GCGCGACCCG
GTGCAATACG GGACGATCAC GCTGTCCGAA ATAGACAACC GCTTGCAGGC TCTGGCTGCA
GAGCTGGGCG TGCAGGTGGA ATCGTTTCAG ACGAACAGCG AAGGAGCCAT GTGCGAGCGC
ATTCACCAGG CCTTCGAAGA GCGTTGCGAT GCCGTGCTGA TCAACGCGGG AGCGTGGACA
CACTACAGCT ACGGGATACG CGATGCGCTG GCGATTCTCA CCTGCCCGGT GGTGGAGCTG
CACATGTCCA ATGTTCACGC GCGGGAGCCG TTTCGGCACC ACTCTGTTTT TTCGGAGGTC
GTCGTTGGCC AGATTTGCGG GTTTGGTATG GAGAGCTATC TGCTGGCCTT GCGGGCCGCA
GTCGCGCAGA GCGGTTGCAG TTGA
|
|---|
| Protein sequence | MKKVLMLHGI NHNMFGKRDP VQYGTITLSE IDNRLQALAA ELGVQVESFQ TNSEGAMCER
IHQAFEERCD AVLINAGAWT HYSYGIRDAL AILTCPVVEL HMSNVHAREP FRHHSVFSEV
VVGQICGFGM ESYLLALRAA VAQSGCS
|
|---|
| |