Gene Bphy_6019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6019 
Symbol 
ID6247589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp561902 
End bp562813 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID642597725 
ProductLysR family transcriptional regulator 
Protein accessionYP_001862127 
Protein GI186470809 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.176233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.34418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA TCCCGACCGA ACTGCCCGAT CTGAAGCTGT TGCAGCTTTT CGACCTGCTC 
TATGACGTCC GCAGCGTGAC TCGCGTGGCG GAGCAACTTG GACAAAGCCA GCCGACCGTC
AGCATCTGGC TGGGGCGGCT GCGTGAATTT CTGCAGGACC CGCTCTTCAT CCGCACACCC
GGCGGCATGG CGCCGACGCC GCAGGCGGAC GCGCTGATCG GGCCGTGCCG CGAGATTCTG
GAATCGCTGC GGCGGTTCGC GGCGTGGGAA ATCGCCTTCG ATCCGACTAC GGCAAAACGC
CGCTTTCGCA TTTGCATGAC GGATGCGAGT CACATCACGC TGCTTCCCCG CATGCTGGCG
CACATACGTG CGCAGGCACC CGGCATTCGC CTCGAGGCGG CGACGATAGA CGGCAACACG
GAGCGGGCGC TCGAATCCGG CGAGGCTGAT CTGGCCATCG GCCATGTGCC GTGGCTAGGC
GGCGGCATTT ACCAGCAGCA GTTGTACACA CAGGACTGGG TGTGCCTGGC GAATCCGCAT
CATCCGCGTG TGCGGGCCCG GTTCGGGGTG AAGCAGTATC GCGCAGAAGG ACATGTCGCG
ATCACGGCGG GGACAGGCGC CCAGTTGCTG GAGCAGGCGC TCTTGCGGGA GCAGATTCAG
CGCGACGTCG TGCTGGAACT GCCGGGATTT CTGGGGCTCG GTGCAATCAT CCGGACGACC
GACCTGATTG CTACGCTGCC GCGACACATC GGTCAGACGC TCGCTCAGGT CAATGAACTG
TCGGTTCATC CGTGTCCGTT TCCCGTGGAC GGCTTTGCCG TGCGGCAGCA TTGGCACGCC
AGGTATCACC ACGAAGCGGG CAACCGGTGG CTGCGCGAGA CAGTCGTGCA GTTGTTTGGT
GGCGCGCGTT GA
 
Protein sequence
MAMIPTELPD LKLLQLFDLL YDVRSVTRVA EQLGQSQPTV SIWLGRLREF LQDPLFIRTP 
GGMAPTPQAD ALIGPCREIL ESLRRFAAWE IAFDPTTAKR RFRICMTDAS HITLLPRMLA
HIRAQAPGIR LEAATIDGNT ERALESGEAD LAIGHVPWLG GGIYQQQLYT QDWVCLANPH
HPRVRARFGV KQYRAEGHVA ITAGTGAQLL EQALLREQIQ RDVVLELPGF LGLGAIIRTT
DLIATLPRHI GQTLAQVNEL SVHPCPFPVD GFAVRQHWHA RYHHEAGNRW LRETVVQLFG
GAR