Gene Bphy_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6006 
Symbol 
ID6247576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp541525 
End bp542193 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID642597712 
Producthypothetical protein 
Protein accessionYP_001862114 
Protein GI186470796 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.448232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATA CCTCCGCTGC CTACGGCTTA TGGCTACTCG CGGCCGTGAA CTCGGCTTTT 
TTTATCTTCT TCGCCTTCAC GTTTTATAAA CCGAAGACGA AGCGGGATTG GCGCTCGCTC
GGCGCGTTCT CGGCCTTTAT CGTGGCGCTG TTTTCCGAAA TGTATGGATT TCCGCTGACC
ATCTATTTGC TGTCGGGCTG GCTGCAGTCC CATTATCCGC AGGTGAACTG GTTTTCGCAC
GATGCGGGGC ACCTCCTGGA AATGATGTTC GGCTGGAAGG TCAATCCGCA TTTCGGCCCA
TTCCATCTGC TGAGTTTCGT GTTTATCGGC GGCGGCTTCT GGATTATTGC GTCCGGATGG
CAAGTCCTCT ATCGGGCTCA GCGCCGTCAC ACACTCGCCA CGACGGGTGT CTACGCGTAC
GTTCGCCATC CGCAGTACGT TGGCTTCATG CTGATCATGT TCGGGTTTCT GCTGCAATGG
CCAACCCTGC TCACGCTCGC CATGTTCCCG GTACTTGTCT ACATGTACAC GCGCCTCGCG
CACTCCGAGG AGCGCGATTC GCTCGCCGAG TTTGGCCTCG CCTACCGGCG CTACATGGAC
GAAGTTCCGG CTTTCATTCC GAAGCTCGGC GCACATCATG GCGGTTCGAC GCACGACTCT
GCCAGTTGA
 
Protein sequence
MHDTSAAYGL WLLAAVNSAF FIFFAFTFYK PKTKRDWRSL GAFSAFIVAL FSEMYGFPLT 
IYLLSGWLQS HYPQVNWFSH DAGHLLEMMF GWKVNPHFGP FHLLSFVFIG GGFWIIASGW
QVLYRAQRRH TLATTGVYAY VRHPQYVGFM LIMFGFLLQW PTLLTLAMFP VLVYMYTRLA
HSEERDSLAE FGLAYRRYMD EVPAFIPKLG AHHGGSTHDS AS