| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5985 |
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| Symbol | |
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| ID | 6247556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 519599 |
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| End bp | 521524 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597692 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001862094 |
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| Protein GI | 186470776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAA CGCCCAGCCA GGCGAACTGC TTTGCCTCCG TCTCGACACC GTTCGGAACG
GATGTGCTGC TGCTCGACGG ATTCGGAGGC CGCGAAGCGA TAGCGGAGTT GTTTCATTTC
GATCTGCGCA TGCGCTCGAC GAACAAGGCA CTCGACCCTC AGCAAATCGT CGGCAAGAGC
GCAACGGTGA CGCTGAAGGA CCACACAGGC GTCGCCCGCT ATTTCAATGG AATCGTCACA
CGCTTCGCGC ACGCGGGCGC GGACGTGCAA TACGGGTTCT ATTCTGCTGA ACTGGCTCCG
CGTCTGTGGC TGCTCTCGCT GGGTCAGGAC CGTGTCATCT GGCAGAACCT GAGCGCACTC
GAGATCATCA AGAAGGTGCT GGGTACGTTC GGCGTGACTT TCGAGGACCG CACGAAGCAC
AGCAGCAACT ACCTCGCGCG CGAATACTGC GTCCAGTACG ACGAAAGTGC GTTCCGGTTC
ATCTCGCGCC TGATGGAAGA AGAGGGCATC TTCTACTTCT TCACATTCGC GGACGGCGCG
CACACGATGG TGCTGGCGGA CGATCCATCG GCGCACGAAG CCACGGTGGC AGGAACACTC
TATTTCGCGC CCGATCCGAG CGTCGGCCAG CAGATCCAGC GCCTCAGCGC GTTTGAAATG
TCGCGCGGCG TGGTGGCGGG CGAGCACATT GTCAGCGACT ACGACTACAC GCAGGCGGCC
ACGTTGCTTT CGTCGTCGAA GGGTGCTTCG AGCATTCCGA CGGGGACGCG TTTCACCTTC
CCCGGCAAAT ATGTCGCGGC TTCGCACGGC GACCAGATCG CCGGCACACG TCTCCAGGCA
CATCATGTCG CGCAGCAGAC GGGACGGGGC GAGGGCGCAT ATTACGGCCT CGCGGCAGGC
ACGACGTTCA CGTTGAGCGG TCATCCTGAC AGCGCACTCA ATGTGAGCTA CGTCGTGCGC
GCCGTGCAGC ACGCGGCATC GAACATGACG TATGGCAACG AATTCGACGT CATCCCCGTC
ACCGTGCCGT TTCGCGCTCC CCTTGTTACG CCACGGCCCA TCGTATCGGG TACGCATACG
GCAAAAGTGG TGGGGCCGTC GGACGAAGAG ATCTGGACCG ACTCGCAAGG GCGCATCAAG
CTCAAGTTCT ACTGGGACCG CACGCCTGAT GCCGACCAGA ACAGCTCCTG CTGGGTGCGC
GTGGCACAGG CATCGGCGGG GCCGGGGTGG GGGCATCTGT TTCTGCCGCG CATCGGCGAG
GAAGTGGTGG TCAGCTATGT CGACGGCGAT CCCGACCGCC CGCTTGTGAC GGGTTGTGTC
TACAACGGCA CGAACGCTGT GCCGGTGACT TTGCCGTCGA TGCAAACGCA AAGCGTGATC
CGCTCCCGTT CGTCGAAAGG CGGCACGGCA GGCAACGAAA TCCGCATGGA GGACAAGCTC
AATTCCGAGG AGCTGTATGT CCATGCGCAG AAGGACATGA GCGTCGAGAT CGAAAACGCG
CTCTCCACCA CCGTCAAGGC GGGCGCGGAA ACGCACGTGG TGCTGAAAGG CGATCGCAGC
GTCGAGGTGA GCGAGGGCAA GGAGACGCAC ACCGTCAAAG GCACACGTAC GCTCGACGTG
ACAGGCGATG AAACGCATAC CAACCATGCG GCGTTTGCGC ACAACGTCAG CGGCAATCAC
ACCCACAAGA TCGACGGCAA TTACACATTG AAGGTAGGCG GCAATCTGGT GATCGAAGTC
AGTGGCTCGA TCAGCATCAA GGCGGGCACG TCGTTGTCCA GCGAAGCGGG CACGTCGCAC
GCGAGCAAGG CGGGGACGAC GCTCAGCAGC GAAGGCATGA CAGTTTCGCA TAAGGCCTCG
GCCACGCAGA CTGTCGATGG CGGCGGTCAG CTCGCCCTCA AGGGCGGCAT CGTCCAGCTC
AACTGA
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| Protein sequence | MSTTPSQANC FASVSTPFGT DVLLLDGFGG REAIAELFHF DLRMRSTNKA LDPQQIVGKS
ATVTLKDHTG VARYFNGIVT RFAHAGADVQ YGFYSAELAP RLWLLSLGQD RVIWQNLSAL
EIIKKVLGTF GVTFEDRTKH SSNYLAREYC VQYDESAFRF ISRLMEEEGI FYFFTFADGA
HTMVLADDPS AHEATVAGTL YFAPDPSVGQ QIQRLSAFEM SRGVVAGEHI VSDYDYTQAA
TLLSSSKGAS SIPTGTRFTF PGKYVAASHG DQIAGTRLQA HHVAQQTGRG EGAYYGLAAG
TTFTLSGHPD SALNVSYVVR AVQHAASNMT YGNEFDVIPV TVPFRAPLVT PRPIVSGTHT
AKVVGPSDEE IWTDSQGRIK LKFYWDRTPD ADQNSSCWVR VAQASAGPGW GHLFLPRIGE
EVVVSYVDGD PDRPLVTGCV YNGTNAVPVT LPSMQTQSVI RSRSSKGGTA GNEIRMEDKL
NSEELYVHAQ KDMSVEIENA LSTTVKAGAE THVVLKGDRS VEVSEGKETH TVKGTRTLDV
TGDETHTNHA AFAHNVSGNH THKIDGNYTL KVGGNLVIEV SGSISIKAGT SLSSEAGTSH
ASKAGTTLSS EGMTVSHKAS ATQTVDGGGQ LALKGGIVQL N
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