| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5984 |
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| Symbol | |
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| ID | 6247555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 516865 |
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| End bp | 519594 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597691 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001862093 |
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| Protein GI | 186470775 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG ATATCCGCAC CCTGTTGAGC CGGCTCAATC CGGAATGCAA GCTTGCGATG
GAGCAGGCGG CGCAACTGTG TGTGCGTCAG ACGCACTACA ACGTCGACGT CGAGCATCTT
CTGTTGACGC TGCTCGAATC CGATGCGCCT GACCTGCGCG CCATTCTTGC GCACTTCGAC
ATCAAACCCG AAACGCTCAC CGCACAACTC CAGAAGGCCG TCGATCTTTT CAAGCGGGGC
AATGGCCGCA CGCCCGCGCT GTCGCCGAAT TTTTCTCCGC TCTTCCAGGA GGCGTGGCTG
CTGAGTTCGA TGCTCCTCGG CGAGCAACAG GTCCGCTCGG GCACGCTCAT CCTGGCGCTA
CTCGAAGTGG GCAGTCTGCG CGGCATGCTG CTTGAATCCG CGCCCGCCTT GCTCAAGATT
CCGCGCGCGA GCCTGCGCGA GCAGATCGGC ATGATCGTCG CGGGCTCGGC GGAAGATGCG
GGCGGTGCGC AGGCGCGTGC GTCGGCCGCG CCGGGAGCGG GGCAACCGGG CCCCGCGAGC
TCCGCTGCTG CACCGCAGTT GGACGGCGGT ATGCCGACCA TGCCTTCTGG CGCTACCGCG
AGCCAGGGTC GTCAAACCGC ACTCGATCAA TACACGGTCG ATCTGACGGG GTTCGCCCGC
GAGGGCAAAA TTGACCCGAT CCGTGGACGC GATGCGGAGA TCCGGCAGCT GATCGATGTG
CTGCTGCGTC GCCGTCAGAA CAACCCGATC CTGACGGGCG AGGCGGGAGT CGGGAAGACA
GCCGTCGTCG AAGGTTTCGC ACAGCGCATC GTTCAGGGCG ACGTGCCGCC CGCGCTGGCC
AACGTTTCCG TTCGTTCGCT CGATCTTGCG CTGTTGCAAG CGGGAGCCGG GGTGAAGGGT
GAGTTCGAGA ACCGGCTCAA ATCGGTGATC GCCGAGGTCA AAGCGTCGCC CGCGCCTGTG
ATTCTTTTCA TTGACGAAGC GCACCAACTG ATTGGCGCGG GCGGTAGCGA AGGCCAAGGC
GACGCCGCGA ACCTTCTCAA GCCGGCATTG GCGCGTGGCG AACTGCGTAC CATTGCCGCC
ACGACGTGGG CCGAATACAA GAAATACGTT GAGCGCGATC CGGCGCTTGC GCGCCGCTTC
CAGGTCGTCA AGGTCGAGGA GCCGAGTGAG GCTGTCGCGA TCGAGATGCT GCGCGGCATG
GTTCAGAAAC TGGAAGAACA TCACGGCGTC GAGATTCTCG ACGAAGCGGT GCGAGATGCC
GTGAAGCTCT CGCACCGATA CATCTCCGGG CGCCAGTTGC CGGACAAGGC GATCAGCGTG
CTTGATACGG CCTGCGCGCG TGTCGCGATT GGTCAGAACG GCTTGCCCGA GGACATCGAG
GCACTGGGCC GTTCGATCGA GACGGCCGAA AACCAGCTTC GTATCGCGCG TCACGAAGCC
GCAACGGGCG CTGAGCGCGC CGACGTGATG GCTGGGCTGG TGAAGCAACT GGAAGACGAG
CGCGCGCAGC ACGTGCGTCT CACCGAAAAG CTCACAACCG AAAAGCGGGC GGTGGAAGAG
ATCCTCGCAT GGCGCAAGAA AATTCGAGGC TATCTGACGA ATCAGAACGA TGTGCTGGAA
GCCGAAGATG GCGAGTCGCT GACGGCGAAT CTCTCGCGAC TGGAGAAAGG GCTCGAGGCC
GTGCAAAACG ACGAGCCGAT GGTCCCCGTG TGTGTCGATT CGGAAACGGT CGCGAAGGTG
ATATCCGGCT GGACGGGCAT TCCTGTTGGC CGGATGCTCG CAGATGAGCT CCACACCGTG
CTGTATCTGC AGGACAAGCT TGCGGAACGC GTCGTCGGCC AGGACGAGGC GCTTGACGCC
ATTGCGCGCC GGGTGCGCAC CTTCCGTGCG GATCTCGACG ATCCAGGCAA GCCCGTTGGC
GTCTTCCTGC TCGTCGGACC CAGCGGCGTC GGCAAGACGG AAACGGCGTT TGCGCTTGCC
GACATGCTGT ACGGCGGCGA ACGCAACATG ATCACCGTCA ATATGTCCGA GTTCCAGGAG
GCGCATAGCG TTTCGGGACT CAAGGGCGCG CCGCCGGGCT ATGTCGGATA CGGCCGCGGC
GGCGTGCTGA CCGAGGCGGT GCGACGCCGC CCCTACAGCG TGCTGCTGCT CGACGAAATG
GAGAAGGCGC ATCCCGACGT GCTCGAGCTA TTCTTCCAGG TGTTCGACAA GGGCGTGATG
GAGGACGGCG AGGGCGTTCC CATCGACTTC AAGAACACGC TGATCCTGCT TACGTCGAAT
GCCGCGCAGG ATGTGATCAC CGACGCATGC CGGGGCGGGC GCCGCCCGCC GCCCGAAGAG
CTGATAGAGA AACTGCGCCC CGCGCTCCTC AAACAGTTCA GCCCCGCATT CCTCGGCCGG
CTCGTACTCG TGCCGTACTA CCACCTCGGC GACGCGCAGA TCAACGCAAT CGTCAACCTC
AAGCTCGAAC GGCTCGCGCA GCGATTTTCG CGTAACCATC ACGCGCCCCT CACGTGGGAC
GAAGGTCTCG CCACGCTGAT CGCGCAACGC TGCAAGGAAG TGGACAGCGG CGCGCGCAAC
GTCGACCACA TTCTTACGCA GTCGGTGCTT CCGGAACTGG CGCGCCAGGT GCTCGAGAGA
ATCTCGATAT CGGAGCCGTT CGGCGGCGTG CATCTTGCGC TGAGCGCAGC GGGCGACATC
GCGTTCCGCT TCCTGCCCAA GGAGGCGTAA
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| Protein sequence | MDIDIRTLLS RLNPECKLAM EQAAQLCVRQ THYNVDVEHL LLTLLESDAP DLRAILAHFD
IKPETLTAQL QKAVDLFKRG NGRTPALSPN FSPLFQEAWL LSSMLLGEQQ VRSGTLILAL
LEVGSLRGML LESAPALLKI PRASLREQIG MIVAGSAEDA GGAQARASAA PGAGQPGPAS
SAAAPQLDGG MPTMPSGATA SQGRQTALDQ YTVDLTGFAR EGKIDPIRGR DAEIRQLIDV
LLRRRQNNPI LTGEAGVGKT AVVEGFAQRI VQGDVPPALA NVSVRSLDLA LLQAGAGVKG
EFENRLKSVI AEVKASPAPV ILFIDEAHQL IGAGGSEGQG DAANLLKPAL ARGELRTIAA
TTWAEYKKYV ERDPALARRF QVVKVEEPSE AVAIEMLRGM VQKLEEHHGV EILDEAVRDA
VKLSHRYISG RQLPDKAISV LDTACARVAI GQNGLPEDIE ALGRSIETAE NQLRIARHEA
ATGAERADVM AGLVKQLEDE RAQHVRLTEK LTTEKRAVEE ILAWRKKIRG YLTNQNDVLE
AEDGESLTAN LSRLEKGLEA VQNDEPMVPV CVDSETVAKV ISGWTGIPVG RMLADELHTV
LYLQDKLAER VVGQDEALDA IARRVRTFRA DLDDPGKPVG VFLLVGPSGV GKTETAFALA
DMLYGGERNM ITVNMSEFQE AHSVSGLKGA PPGYVGYGRG GVLTEAVRRR PYSVLLLDEM
EKAHPDVLEL FFQVFDKGVM EDGEGVPIDF KNTLILLTSN AAQDVITDAC RGGRRPPPEE
LIEKLRPALL KQFSPAFLGR LVLVPYYHLG DAQINAIVNL KLERLAQRFS RNHHAPLTWD
EGLATLIAQR CKEVDSGARN VDHILTQSVL PELARQVLER ISISEPFGGV HLALSAAGDI
AFRFLPKEA
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