| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5966 |
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| Symbol | |
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| ID | 6247538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 494740 |
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| End bp | 495882 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642597674 |
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| Product | porin |
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| Protein accession | YP_001862076 |
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| Protein GI | 186470758 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.084261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC TACCTCGCTA TGCAGCGCTT TTCGCGCTGT GTCTGTGTGC AAGTGGAACC
AGCTACGCGC AAAGCGCCGT CACGCTTTAC GGCGTGCTCG ATGACGGCTT GAACTACACC
AGCAACGCGG GCGGACACCA TGCGTTTGCA ATGGTGAGCG GCGATACGGC CGAAACGAGT
TTTGGCCTGA AAGGAACGGA AGATCTCGGC GGCGGACTGA GCGCGATCTT CACCCTCGAA
AGCGGCGTCA ACATCAACAG CGGCCAGCTC AACGAAGGCG GCCGTCTGTT CGGGCGGCAA
GCGTTCGTGG GATTATCGTC CGCGCCCGCG GGCACGCTCA CGTTCGGCCG GCAATACGAT
GCAACGATCG ATATGTGGAG TCCGTTCACG GCGGCCGGAA ACTCGATCGG CGATCTCGCC
GCGCATCCTT TCGACAACGA CAACGCAGAT TTCGACTTCC GGCTCAGCAA CTCGGTGAAG
TACGTTTCGC CGACACTCGC CGGCTTCCAG CTGGAAGGCG TGTACGGCTT CAGCAACGCG
ACGAACTTCG CGTCGAACCG CGCGTATAGC GCGGGCGTGA CGTATGGCAC GGGGCCGTTA
TCCGTCGCGC TGGCCTACCT GCATCTGAAC GGCGCGGGGA CGGGAACCAA CGGCGCCGTG
ACTTCGGACT CCGTGTTCGT CGCGACGCGG CAGCAGAATA TCGTTGCGGG CGTGAAGTGG
ACCTTCTCGA ATAACGCGAA CGTGGCATTA GCGTATTCGC ACGTCGACGT CAGGTCCCCC
ACGGGCAACG GGTACGCGCC AGATATCGGA ACGCAGACAT GGACGTCGTG GAAGTTCGAT
AACATCGAGA TCAACGGGCA GTATTACTTC ATGCCGGATC TCTCGCTGAC GGGCGCGTAC
ACGTTCACGC ACGGAAAGCT CGAATCCACG GCGGGGAGCG ACAGTCCGAA CTGGCACCAG
GTCGCGCTGA TGCTGAACTA CAGCCTTAGC AAACGCACCT CGGTCTATGT GCAGGGCGCC
TGGCAACACA CCAACGCGAA CACGGGCACC GATCTCGATG CCGCGCATAT CGTCGGCTCC
GCCGGACTGT CGTCGTCTGG AAACCAGGCC GTTGCGCGGC TCGCGATGTC GCACAAGTTC
TAG
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| Protein sequence | MNELPRYAAL FALCLCASGT SYAQSAVTLY GVLDDGLNYT SNAGGHHAFA MVSGDTAETS
FGLKGTEDLG GGLSAIFTLE SGVNINSGQL NEGGRLFGRQ AFVGLSSAPA GTLTFGRQYD
ATIDMWSPFT AAGNSIGDLA AHPFDNDNAD FDFRLSNSVK YVSPTLAGFQ LEGVYGFSNA
TNFASNRAYS AGVTYGTGPL SVALAYLHLN GAGTGTNGAV TSDSVFVATR QQNIVAGVKW
TFSNNANVAL AYSHVDVRSP TGNGYAPDIG TQTWTSWKFD NIEINGQYYF MPDLSLTGAY
TFTHGKLEST AGSDSPNWHQ VALMLNYSLS KRTSVYVQGA WQHTNANTGT DLDAAHIVGS
AGLSSSGNQA VARLAMSHKF
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