| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5850 |
|---|
| Symbol | |
|---|
| ID | 6247422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 357564 |
|---|
| End bp | 358202 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642597558 |
|---|
| Product | FMN-binding negative transcriptional regulator |
|---|
| Protein accession | YP_001861960 |
|---|
| Protein GI | 186470642 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2808] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.827228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTAC CCAGTCAATT CAACGAAGAC AACCGCGAAG TGCTGCACGC ACACATCGCG
CAGCATCCGT TCGGGATGCT GGTGACGCAT GGCAAGAGCG GACTGGATGC GAATCACATC
CCTTTCGAAC TGGCCGTGGA AGGAGAGAGC CTGGGCGTAC TGCGCGCGCA TGTCGCGCGG
GCCAATCCCG TCTGGCAGGA TGTCGCGAAC GGCGATGAAG TGCTCGCCGT CTTTCGCGCC
GGCGACGCTT ATATTTCGCC AAACTGGTAT CCGAGCAAGC ACGAAGCGCA CAGGCAGGTG
CCGACGTGGA ACTACATCGT CGTCCATGCG TATGGCCGCA TCACCGTTCG CGATGACGAA
CGATACGTAC GCGGCGTCGT GGGCCGGCTG ACTCGCAAGC ATGAAGCATC GCAAGCGCAA
CCGTGGAAGA TGGCCGACGC GCCGAAGGAT TACATCGATA CCCTGATCCA GACGATTGTC
GGGCTGGAGA TCGAAATCAC GCGGCTGGTC GGCAAGAGCA AGCTGAGCCA GAACAAGGAA
GCGCGCGACA TTCGCGGTGC TGGTGAAGCG CTCAGGGCCC GCGGGCAATT TCAGATCGGC
GACGCGATGC TCGCCCGGTT GAGCGACAAG CCGCAGTGA
|
|---|
| Protein sequence | MYLPSQFNED NREVLHAHIA QHPFGMLVTH GKSGLDANHI PFELAVEGES LGVLRAHVAR
ANPVWQDVAN GDEVLAVFRA GDAYISPNWY PSKHEAHRQV PTWNYIVVHA YGRITVRDDE
RYVRGVVGRL TRKHEASQAQ PWKMADAPKD YIDTLIQTIV GLEIEITRLV GKSKLSQNKE
ARDIRGAGEA LRARGQFQIG DAMLARLSDK PQ
|
|---|
| |