Gene Bphy_5597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5597 
Symbol 
ID6247261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp63055 
End bp64566 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content60% 
IMG OID642597316 
ProductABC transporter related 
Protein accessionYP_001861718 
Protein GI186470400 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.609428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGC TTATTTCCGT CAACCGCCTC AGCAAGAGCT TTCCCGGCGT GAGGGCACTG 
CACGAGGTGC AGTTCGAACT CATGGCGGGC GAAGTACACG CGCTGATGGG CGAAAACGGC
GCAGGCAAGT CGACGCTGAT GAAGATCCTT GCGGGCGTCT ATATGCGCGA TTCAGGCGAG
ATTCTCTACG ACGGCAAGCC CGTGGAGTTC ACCACCCCGC GCGAAGCGCA GGCGCTGGGT
ATCGGCATCA TTCATCAGGA ACTTCAATTG ATGAATCATC TGACCGTCGC GCAGAATATG
TTCATCGGTC GCGAACCGCG CGGGCGTCTC GGTCTGTTTC TGGACGAGGA CAAACTCAAT
GCTCAGGCGC GCGACATCCT CGCGCGCATG CATGTGAATC TCGATCCGCG CACGGTTGTC
GGCTCGCTCA CGGTCGCCAG CCAGCAAATG GTTGAGATCG CCAAGGCACT GTCGTTCGAC
TCGCGCGTAC TGATCATGGA TGAGCCGACC TCCGCGCTGA ATGACGCGGA GATCGCCGAG
CTTTTTCGCA TCATCCGGCA ACTGAAGGAA CGCGGGGTCG GCATCATCTA CATCTCGCAC
AAGATGGATG AACTCAAGCA GATTTCAGAC CGCGTCACCG TGCTGCGCGA CGGCGAATAT
GTCGCCACTG TCGGGACACC GGAAAGCAGC GTGCCCGCGA TCATCGGCAT GATGGTCGGA
CGAAAACTCG CCGACGTCGA GCCTCATCAG AATGCTCACA CGGCAGGCGA AGTCGCGCTG
GAAGTGAAGA ACCTGAACGC CGGACCGCTC GTTAGAAATG TGAGCTTCAC GCTGCGCAAA
GGCGAAATCT TGGGCTTCGC GGGTCTGATG GGCGCGGGCC GCACGGAAGT CGCACGCGCC
GTGTTCGGTG CGGATCCCAT CGAGTCCGGC GAGATCTTCG TAAAGGGTGC CAAGGCGCAG
ATCAAGCGGC CCAGCGACGC GGTCGCGAAC AGCATCGGCT ATTTGTCCGA AGACCGCAAA
CGCTTCGGCC TGGCGACGGG CATGGATGTC GAATCGAACA TCGTGATGTC CGACCTCGGC
AAGTTCCTGT CGTTGAATAT CTTTCTTCGC CGCATGCAGA TACGCAAGCG CGCTTCGCAT
TTCATTAATC TTCTCGCAAT CCGCACGCCT TCACCGACGC AGCCAGTGCG GCTCCTGTCA
GGCGGCAACC AGCAGAAGAT CGTCATCGCA AAGTGGCTGG AGCGCGATTG CGACGTACTG
TTCTTCGACG AGCCGACGCG CGGCATCGAT GTCAGCGCGA AAAGCGAAAT CTACAAGCTG
TTGCGCGCGC TCGCTGCGCA GGGCAAGGCG ATCGTGATGA TTTCGTCGGA GTTACCGGAA
ATCCTGCGCA TGAGCGACCG TATCGTGGTG ATGTGCGAAG GCCGTATCAC TGGCGAACTC
TCCGCCGGCG ACGCGACGCA GGAGCGCATC ATGCACCTCG CAACACAGCG TGAATCCCTG
AAAGCGGCAT AA
 
Protein sequence
MTPLISVNRL SKSFPGVRAL HEVQFELMAG EVHALMGENG AGKSTLMKIL AGVYMRDSGE 
ILYDGKPVEF TTPREAQALG IGIIHQELQL MNHLTVAQNM FIGREPRGRL GLFLDEDKLN
AQARDILARM HVNLDPRTVV GSLTVASQQM VEIAKALSFD SRVLIMDEPT SALNDAEIAE
LFRIIRQLKE RGVGIIYISH KMDELKQISD RVTVLRDGEY VATVGTPESS VPAIIGMMVG
RKLADVEPHQ NAHTAGEVAL EVKNLNAGPL VRNVSFTLRK GEILGFAGLM GAGRTEVARA
VFGADPIESG EIFVKGAKAQ IKRPSDAVAN SIGYLSEDRK RFGLATGMDV ESNIVMSDLG
KFLSLNIFLR RMQIRKRASH FINLLAIRTP SPTQPVRLLS GGNQQKIVIA KWLERDCDVL
FFDEPTRGID VSAKSEIYKL LRALAAQGKA IVMISSELPE ILRMSDRIVV MCEGRITGEL
SAGDATQERI MHLATQRESL KAA