| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5539 |
|---|
| Symbol | |
|---|
| ID | 6247022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2691448 |
|---|
| End bp | 2692032 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642597258 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001861661 |
|---|
| Protein GI | 186474319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.642633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0183709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGAACGTTTC GTTGCTGGGC AGGCTGTCGC TTGCCTTCGG CACGTTTTTC
AGCATTCTCG GCGACCGCGA CTTCGCCGCG AGCGTGTTGC GCCTGCGCAG CGGCGCCATG
CCCGCCCCGA GCCCGGCTCC GGCGGCTGCC CCCGTCACGC CGCCCGCACC CGCGCCGGCT
CCCGCCCCCG TCGTCATCAA GGAAGCCACG CCCGAAGCCG CGCTGCAACT GCTCGGCCTC
CTGCAACGCG ATGCGCGCTT CATCGATTTC GTCGAGGAAG ACATCGCGAA GTATTCGGAC
GCCGACATCG GCGCCGCTGC GCGCCTCGTG CATGACGGCT GCCGCGCGAC GCTGCGCGAG
CACTTCACGA TCCAGCCGGT GCGCGACGAA CCCGAAGGCA GCCGCGTGAC TATCGGCGAA
GGCTTCGACG CGACGGCCAT CCGCCTGACG GGCAACGTGA TCGGCAAGGC GCCGTTCTCG
GGCAGCATCA GCCATCGCGG GTGGCGCGCC GCCGAGGTTC GCCTGCCGAA GCTCACGGCC
AGCCACGACG CGACCGTGCT CGCCCCTGCG GAGGTGGAAC TATGA
|
|---|
| Protein sequence | MTEPNVSLLG RLSLAFGTFF SILGDRDFAA SVLRLRSGAM PAPSPAPAAA PVTPPAPAPA
PAPVVIKEAT PEAALQLLGL LQRDARFIDF VEEDIAKYSD ADIGAAARLV HDGCRATLRE
HFTIQPVRDE PEGSRVTIGE GFDATAIRLT GNVIGKAPFS GSISHRGWRA AEVRLPKLTA
SHDATVLAPA EVEL
|
|---|
| |