Gene Bphy_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5506 
Symbol 
ID6246990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2660696 
End bp2662297 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content64% 
IMG OID642597226 
Producthypothetical protein 
Protein accessionYP_001861629 
Protein GI186474287 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.286213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC CGCCCGAGCT ACCCGAGGCC GTCGCCGTGC CGCACAAGCG CTGGCGTATC 
CAGTGGATCT GGATCGTGCC TGTCGTCGCC GTGCTGGTCG GTGCCTGGCT CGCCTTGCAG
GCCGTGCTCT CGCAAGGTCC GACCATTACG ATCAGCTTCA AGACCGGCGA AGGACTCGAA
GCGGGCAAGA CGAAGATCAA GTTCAAGGAC GTCGATATCG GCGTCGTGAA GAAAGTCACG
CTGTCGGACG ACTACAAGCG CGTCGTCGCG ACAGCGGAAC TCACGCGCGA TGCCACCGAC
ATGCTGGTCG ACGACACCCG CTTCTGGGTC GTCAGACCGC GCATCGCAGG GGGCACGGTG
TCGGGCATCA GCACGCTGCT ATCGGGCGCC TTCATCGGCA TGGACATCGG CAAGACGAAA
CAGGCGCGGC GCGATTACAC CGGACTCGAA GTGCCGCCTG TGTTCGCGAG CGATGTGCCG
GGCCGCGAGT TCGTGCTGAA GGCCACCGAC CTCGGCTCCG TCGATGTCGG CACGCCTGTG
TATTTCCGGC GCCTGCAGGT GGGCCAGGTG ACCTCGTTCG ATCTCGACAA GGACGGCGGC
GGCGTCACAC TGCATGTGTT TATCAATGCG CCGTACGACC GCTACGTGAA TCGCGATTCG
CGCTTCTGGC AGGCAGGCGG CATCGACCTC ACGCTCGGCA CCGACGGCGT GCAGATCAAC
ACGCAGTCGG TGGTGTCGAT ACTGGTCGGC GGGCTCGCGT TCGAGACGCC CGCGAATTCG
CTCACACTAC CCGAGGTCGA GCCCAAAGCG ACCTTCCCGC TGTTCGCCAC ACGCAGCGAT
GCGTTGAAAC AGCATGAGAG TATCGTCGAA ATGTTTGCTT TCGATTTTCG TGGTTCCGTG
CGCGGCCTCG TCGTAGGCGC GCCCGTCGAT TTCCGCGGCA TCACAGTCGG TGAAGTCTCG
GCAATCTACA CGCGCGTCGA TCCCGTCACG AAGCAGATCA GCATTCCCGT CGAGGTCAAG
CTGTACCCCG AACGCTTCAC GTCGCGCTAT GCGACAGAGC CGAAAGGCGG ACGCGTGGGC
GAGAATCCGC GCACACTCGC CGATTTCCTC GTCGAACGCG GTCTGCGGGG GCAACTCAAA
ACGGGCAGTC TGCTCACGGG TCAACTGTAC ATCGCGCTCG ACTTCTTCCC CGATGCGCCG
AAAGCGCATG TCGACTGGAG CCGCACGCCG CCCGAGTTGC CGACCACGCC AAGCGGCCTG
CAGTCGCTGC AGGAGTCGCT GAACCGGATC ATCGCGCGTG TCGACAGCTT GCCGCTCGAA
CAGATCGGCA AGAACGCTCA GCAGACGCTT GCCAACACCA GTTTGCTGAT GCGCAACCTC
AACACGCAGG TCGTGCCGCA GGCGAAGAAC GCGCTAACCG CCGCCCAGGC GACGCTCGAT
TCCGCAAACA CCGCCCTTCA GCCCGATTCG GCGCTGCAAC AGGATACGAG CGACGCGGTC
CGCGAACTCG CCCGTACGGC TGCGTCGTTC CGTGCGCTCT CCGACTATCT TCAGCGCCAT
CCGGAAGCGC TGCTGCGAGG CAAAACGGAG GATGCGAAAT GA
 
Protein sequence
MSRPPELPEA VAVPHKRWRI QWIWIVPVVA VLVGAWLALQ AVLSQGPTIT ISFKTGEGLE 
AGKTKIKFKD VDIGVVKKVT LSDDYKRVVA TAELTRDATD MLVDDTRFWV VRPRIAGGTV
SGISTLLSGA FIGMDIGKTK QARRDYTGLE VPPVFASDVP GREFVLKATD LGSVDVGTPV
YFRRLQVGQV TSFDLDKDGG GVTLHVFINA PYDRYVNRDS RFWQAGGIDL TLGTDGVQIN
TQSVVSILVG GLAFETPANS LTLPEVEPKA TFPLFATRSD ALKQHESIVE MFAFDFRGSV
RGLVVGAPVD FRGITVGEVS AIYTRVDPVT KQISIPVEVK LYPERFTSRY ATEPKGGRVG
ENPRTLADFL VERGLRGQLK TGSLLTGQLY IALDFFPDAP KAHVDWSRTP PELPTTPSGL
QSLQESLNRI IARVDSLPLE QIGKNAQQTL ANTSLLMRNL NTQVVPQAKN ALTAAQATLD
SANTALQPDS ALQQDTSDAV RELARTAASF RALSDYLQRH PEALLRGKTE DAK