Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5506 |
Symbol | |
ID | 6246990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2660696 |
End bp | 2662297 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642597226 |
Product | hypothetical protein |
Protein accession | YP_001861629 |
Protein GI | 186474287 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.286213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC CGCCCGAGCT ACCCGAGGCC GTCGCCGTGC CGCACAAGCG CTGGCGTATC CAGTGGATCT GGATCGTGCC TGTCGTCGCC GTGCTGGTCG GTGCCTGGCT CGCCTTGCAG GCCGTGCTCT CGCAAGGTCC GACCATTACG ATCAGCTTCA AGACCGGCGA AGGACTCGAA GCGGGCAAGA CGAAGATCAA GTTCAAGGAC GTCGATATCG GCGTCGTGAA GAAAGTCACG CTGTCGGACG ACTACAAGCG CGTCGTCGCG ACAGCGGAAC TCACGCGCGA TGCCACCGAC ATGCTGGTCG ACGACACCCG CTTCTGGGTC GTCAGACCGC GCATCGCAGG GGGCACGGTG TCGGGCATCA GCACGCTGCT ATCGGGCGCC TTCATCGGCA TGGACATCGG CAAGACGAAA CAGGCGCGGC GCGATTACAC CGGACTCGAA GTGCCGCCTG TGTTCGCGAG CGATGTGCCG GGCCGCGAGT TCGTGCTGAA GGCCACCGAC CTCGGCTCCG TCGATGTCGG CACGCCTGTG TATTTCCGGC GCCTGCAGGT GGGCCAGGTG ACCTCGTTCG ATCTCGACAA GGACGGCGGC GGCGTCACAC TGCATGTGTT TATCAATGCG CCGTACGACC GCTACGTGAA TCGCGATTCG CGCTTCTGGC AGGCAGGCGG CATCGACCTC ACGCTCGGCA CCGACGGCGT GCAGATCAAC ACGCAGTCGG TGGTGTCGAT ACTGGTCGGC GGGCTCGCGT TCGAGACGCC CGCGAATTCG CTCACACTAC CCGAGGTCGA GCCCAAAGCG ACCTTCCCGC TGTTCGCCAC ACGCAGCGAT GCGTTGAAAC AGCATGAGAG TATCGTCGAA ATGTTTGCTT TCGATTTTCG TGGTTCCGTG CGCGGCCTCG TCGTAGGCGC GCCCGTCGAT TTCCGCGGCA TCACAGTCGG TGAAGTCTCG GCAATCTACA CGCGCGTCGA TCCCGTCACG AAGCAGATCA GCATTCCCGT CGAGGTCAAG CTGTACCCCG AACGCTTCAC GTCGCGCTAT GCGACAGAGC CGAAAGGCGG ACGCGTGGGC GAGAATCCGC GCACACTCGC CGATTTCCTC GTCGAACGCG GTCTGCGGGG GCAACTCAAA ACGGGCAGTC TGCTCACGGG TCAACTGTAC ATCGCGCTCG ACTTCTTCCC CGATGCGCCG AAAGCGCATG TCGACTGGAG CCGCACGCCG CCCGAGTTGC CGACCACGCC AAGCGGCCTG CAGTCGCTGC AGGAGTCGCT GAACCGGATC ATCGCGCGTG TCGACAGCTT GCCGCTCGAA CAGATCGGCA AGAACGCTCA GCAGACGCTT GCCAACACCA GTTTGCTGAT GCGCAACCTC AACACGCAGG TCGTGCCGCA GGCGAAGAAC GCGCTAACCG CCGCCCAGGC GACGCTCGAT TCCGCAAACA CCGCCCTTCA GCCCGATTCG GCGCTGCAAC AGGATACGAG CGACGCGGTC CGCGAACTCG CCCGTACGGC TGCGTCGTTC CGTGCGCTCT CCGACTATCT TCAGCGCCAT CCGGAAGCGC TGCTGCGAGG CAAAACGGAG GATGCGAAAT GA
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Protein sequence | MSRPPELPEA VAVPHKRWRI QWIWIVPVVA VLVGAWLALQ AVLSQGPTIT ISFKTGEGLE AGKTKIKFKD VDIGVVKKVT LSDDYKRVVA TAELTRDATD MLVDDTRFWV VRPRIAGGTV SGISTLLSGA FIGMDIGKTK QARRDYTGLE VPPVFASDVP GREFVLKATD LGSVDVGTPV YFRRLQVGQV TSFDLDKDGG GVTLHVFINA PYDRYVNRDS RFWQAGGIDL TLGTDGVQIN TQSVVSILVG GLAFETPANS LTLPEVEPKA TFPLFATRSD ALKQHESIVE MFAFDFRGSV RGLVVGAPVD FRGITVGEVS AIYTRVDPVT KQISIPVEVK LYPERFTSRY ATEPKGGRVG ENPRTLADFL VERGLRGQLK TGSLLTGQLY IALDFFPDAP KAHVDWSRTP PELPTTPSGL QSLQESLNRI IARVDSLPLE QIGKNAQQTL ANTSLLMRNL NTQVVPQAKN ALTAAQATLD SANTALQPDS ALQQDTSDAV RELARTAASF RALSDYLQRH PEALLRGKTE DAK
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