Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5477 |
Symbol | |
ID | 6246961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2626066 |
End bp | 2627121 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642597197 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_001861600 |
Protein GI | 186474258 |
COG category | [V] Defense mechanisms |
COG ID | [COG4257] Streptogramin lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.521709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGCGG ACGTGATTCA CATCGCAAAT GCAGTGGCTT CGGCGACGGT GAAAGGAATC TTCGCATCCC GGTTCTTCCG ATATTTCGCT TCGGTTCTGG TCGGCGCGAT GTGGGCAACA GTTTCAGCAC AGGCTCAATC CCCTTCGTTC GACTCATTTG CCGTCCCCTC CGGCAGCGCA CCGCACGATG TCGCGCCAGA GCCTGGCGGC GCCGTCTGGT ACACCGCACA GGCGCAAGGC GCAGTCGGAA GGCTCGACCC GCGCAGTGGC AAGACGGAGC GGATTCCGCT CGGCAACGGA TCTGCGCCGC ACGGCGTGAT CGTCGGCCCG GATGGAGCAG CATGGATTAC CGATGGCGGG CTGAACGCAA TCGTGCGCGT CGATTCGAAG ACACTCGCTG TCAGGCGCTT CGCGTTGCCC AAAGACCGAC GGAACGCGAA CCTGAACACG GCCGTTTTCG ACAAACGCGG GCACCTGTGG TTTACCGGAC AAGGCGGTAT CTATGGTGAG CTTGACCCGG AAAGCGGCGG TATGCGCGTG TTCGATGCAC CCCGTGGGCC GGGTGCCTAT GGGATCTGTG TCACCCCTGA CGGCAGCTTG TACTTCGCTT CACTGGCTGG CAGCTACCTC GGCCGCATTG ATCCGGTGAC AGGAGCGGCG CAAGTCATCG AGCCTCCAAC ACCGGAACAG GGAGCGCGCC GGGCATGGTC CGATTCAAAA GGACGAGTCT GGATCAGCGA GTGGAACGCA GGCAAGGTGG GAGCGTTCGA CCCGGCGACG CATCGGTGGC GCGAATGGAA ACTGCCGGGC TCGAATTCTC ATGCGTATGC GATATTCGTC GACGACCAGG ATATCGTCTG GCTCAGCGAA TGGAGCGCTA ACGCGCTAGT GCGCTTCGAC CCACGAACGG AACGATTCGA GACGTTTGCG CTGCCCCGCC CACACGCGAA CGTACGCCAG ATGATGGGCA GGCCGGGCGA AGTCTGGCTG TCGGAGTCTG GCACGGATCA CTTGCTGCGC TACCGCTCCG GGGCAGCGGT TGGCGGTAGC AAGTGA
|
Protein sequence | MEADVIHIAN AVASATVKGI FASRFFRYFA SVLVGAMWAT VSAQAQSPSF DSFAVPSGSA PHDVAPEPGG AVWYTAQAQG AVGRLDPRSG KTERIPLGNG SAPHGVIVGP DGAAWITDGG LNAIVRVDSK TLAVRRFALP KDRRNANLNT AVFDKRGHLW FTGQGGIYGE LDPESGGMRV FDAPRGPGAY GICVTPDGSL YFASLAGSYL GRIDPVTGAA QVIEPPTPEQ GARRAWSDSK GRVWISEWNA GKVGAFDPAT HRWREWKLPG SNSHAYAIFV DDQDIVWLSE WSANALVRFD PRTERFETFA LPRPHANVRQ MMGRPGEVWL SESGTDHLLR YRSGAAVGGS K
|
| |