Gene Bphy_5474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5474 
Symbol 
ID6246958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2623711 
End bp2624244 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID642597194 
Productformaldehyde-activating enzyme 
Protein accessionYP_001861597 
Protein GI186474255 
COG category[S] Function unknown 
COG ID[COG1795] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03126] formaldehyde-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0338658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0655052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG ATTTAACGTT CCGTGCCGGC GAAGCAACCG TATTCGCCGC GCCCGGCCAG 
GTGACCGATG CGATGCCTGA GATTCTGATC GGCCGCGTCG ACGGGCCCGT CGGTCACGCG
TTCGCGAACA TGATGGCGCA GAGCAAAGGA CACACGGCCA TGTTCGCGAT CCGCGCGTGC
AATCAGCTGG TTCGGCCCGC CACAATGATG GTGCCCAAGG TGACGCTTCG GGACATGACG
ACGATCGAAT TGTTCGGCGG CGTCGTGCAA TCGGCCACGG CGGATGCGAT CGTCGATTGC
CTGATCGAAG GGATCTTGCC GAAAGACCAG GCGAACGAAA TCTGCATCGT CAGTCTGGTG
TGGATCGATC CGCGCTGCGC GACGGAGACG AACCTCGACA AGAAGGACAT GTACCGGACA
AATTACGAGG CAACCAAACT CGCGATCCAG CGTGCGATGA ACAACGCGCC GAGCGTGGAG
ACGCTCATCG CGAACCGCCA CACCATCAAG CACGACATGG ACGACTGGAG CTGA
 
Protein sequence
MSIDLTFRAG EATVFAAPGQ VTDAMPEILI GRVDGPVGHA FANMMAQSKG HTAMFAIRAC 
NQLVRPATMM VPKVTLRDMT TIELFGGVVQ SATADAIVDC LIEGILPKDQ ANEICIVSLV
WIDPRCATET NLDKKDMYRT NYEATKLAIQ RAMNNAPSVE TLIANRHTIK HDMDDWS