| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5473 |
|---|
| Symbol | |
|---|
| ID | 6246957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2622326 |
|---|
| End bp | 2623384 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642597193 |
|---|
| Product | Dyp-type peroxidase family protein |
|---|
| Protein accession | YP_001861596 |
|---|
| Protein GI | 186474254 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.308432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0526287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACG ACATTCCAGA ACCCCAAGCC GTCTATGCAC CGATCACGCG CAGTGCGATC
TTTATCGTCG CAACGCTCGC CGACGGTGAC GCGCATGCGG ATACGTTGCG CGCCTGGTGC
GCGGACATTG CCGCGCTCGT GCGCTCGGTC GGCAAGCGCG TGCCGGCCGG CAACCTGTCG
TGTGTGACGG GCTTCGCTTC CGACGCATGG GACAAGCTGT TCGGCGCGCC TCGCCCTGCA
CTGCTTCATC CGTTTCGCGA GTTCGGTCCG AGCGAGCGCC ACGCGCCTGC CACCCCGGGC
GACATCCTGC TGCACATCCG TGCGGACCAG ATGGATCTGT GCTTCGAACT CGCGACGCAA
CTCGTGGGGC GGTTGGGCGA TGCCGTGAAG GTCGTCGACG AAGTGCATGG CTTCCGCTAT
TTCGATCAGC GCAGCATGGT CGGTTTCGTC GACGGCACGG AGAACCCGAC GGGCCGCGAG
GCCGTCGACT TCACGATGAT CGGTGACGAA GACCCTGACT TCGCTGCGGG CAGCTACGTG
CTCGTGCAAA AGTACATCCA CGACATGAAA GGCTGGAACG CGCTCTCCGT CGAGACACAG
GAGCGCATCA TCGGCCGCAC CAAGTTGTCG GACATCGAAC TCGACGAAAG CGTCAAGCCG
ACGTCGTCGC ATAGTTCGCT GACGACGCTC GTCGAGAACG GCCAGGAAGT GAAGATCCTG
CGCGACAACA TGCCGTTCGG GCGGCCCGGC TCGGGCGAGT TCGGCACGTA CTTCATCGCG
TATGCCCGCT CGCCCGCCCC GATCGAGAAG ATGCTGGAGA ACATGTTCGT CGGCCGCCCG
CCCGGAAACT ACGACCGGCT GCTCGATTTC AGCCGCGCGG CGACGGGCGG GCTCTTTTTC
GTCCCCTCGG CGCCGCTGCT GGAAGCGCTA GCGGATCGCG AGCCACAGCC CGCAAGCGCG
AGCGCGGCTG CGTCTGCCGA CACCTTCGCT TGCGCCGAGC CGGGCCACGA CGGCTCGCTG
AATATCGGCT CTTTGAAAGG AACTGCTCAA TATGAATAA
|
|---|
| Protein sequence | MPNDIPEPQA VYAPITRSAI FIVATLADGD AHADTLRAWC ADIAALVRSV GKRVPAGNLS
CVTGFASDAW DKLFGAPRPA LLHPFREFGP SERHAPATPG DILLHIRADQ MDLCFELATQ
LVGRLGDAVK VVDEVHGFRY FDQRSMVGFV DGTENPTGRE AVDFTMIGDE DPDFAAGSYV
LVQKYIHDMK GWNALSVETQ ERIIGRTKLS DIELDESVKP TSSHSSLTTL VENGQEVKIL
RDNMPFGRPG SGEFGTYFIA YARSPAPIEK MLENMFVGRP PGNYDRLLDF SRAATGGLFF
VPSAPLLEAL ADREPQPASA SAAASADTFA CAEPGHDGSL NIGSLKGTAQ YE
|
|---|
| |