Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5456 |
Symbol | |
ID | 6246940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2601950 |
End bp | 2604193 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642597176 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001861579 |
Protein GI | 186474237 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.897377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0127926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACA AGCAACCTAC GATCATCTAC ACCCTGACCG ACGAAGCCCC GCTGCTCGCG ACGAGTGCCT TTCTGCCGAT CATCCGTACG TTTACCTCTC CGGCTGGCGT CAATGTCGAG ACCAGCGACA TTTCGGTGGC AAGCCGTATC CTCGGCGAAT TCCCGGAATT TCTGACGGAA GAGCAGCGCG TGCCGGACAA CCTGGCCGAG CTCGGCCGCC TCACGCAAGA CCCGGACACG AACATCATCA AGCTGCCGAA CATTTCGGCG TCGGTGTTCC AGCTGGTCAG CGCGATCAAG GAACTGCAGT CGAAGGGCTT CAAGGTGCCG GACTATCCGG AAGACCCGAA GAACGAGGAA GAAAAGGCGA TCCAGAAGCG TTACTCGAAG TGCCTCGGCT CGGCCGTGAA CCCGGTTCTG CGCGAAGGCA ACTCGGACCG CCGTGCGCCC GCCGCCGTGA AGAACTACGC GAAGAAGCAT CCGCATAGCA TGGCCGAGTG GAGCATGGCG TCGCGCACCC ACGTTGCGCA CATGAAGCAT GGCGACTTCT ACCACGGCGA AAAGTCGATC ACCAACGACA AGGCACGTGA AGTTCGCATG GAACTCGTCA CGAAGCGCGG CGAGACGATC GTGCTGAAGC CGAAGGTTTC GCTGCAGGAA GGCGAGATCG TCGACAGCAT GTTCATGAGC AAGAAGGCGC TGGTCGAATT CTACGAAGAC CAGATGGAAG ACGCGCACAA GACGGGCGTG ATGCTGTCTC TGCACGTGAA GGCGACGATG ATGAAGGTCT CGCACCCGAT CGTCTTCGGT CATGCCGTCA AGGTGTTCTA CAAGGACGCA TTCGCGAAGC ACCAGAAGCT GTTCGACGAA CTCGGCGTGA ACGTCAACAA CGGCCTCGTC GACCTGTACA CGAAGATCGA GGCGCTGCCG GAATCGCAGC GCGAAGAGGT GATCCGCGAC ATGCACGCAT GCCACGAGCA TCGACCGGCG CTGGCGATGG TCGATTCGGC GAAGGGCATC TCGAACCTGC ATGCACCGAA CGATGTGATC GTCGACGCGT CGATGCCCGC GATGATCCGC GCAGGCGGCA AGATGTGGGG CGCCGACGGC CGTCCCGCCG ACACGAAGTG CCTGATTCCC GAAAGCACGT TCGCGCGCAT CTACCAGGAA ATCATCAACT TCTGCAAGAC CAACGGCGCA TTCGATCCGC GCACGATGGG CACGGTGCCG AACGTCGGCC TGATGGCGCA GAAGGCGGAA GAGTACGGCT CGCACGACAA GACGTTCGAG ATCAAGGAAG ACGGCGAAGC ACGCATCGTC GACAACGCGA CGGGTGAAGT GCTGACGGCG CTCACGCAGC CGGTCGAGCA GGGCGACATC TGGCGCATGT GCCTCGTGAA GGACGCACCG ATCCGCGACT GGGTCAAGCT TGCTGTCACG CGCGCGCGCA ACTCGGGCAC GCCCGCCGTC TTCTGGCTCG ACCCGTACCG TCCGCATGAA AACGAACTGA TCAAGAAGGT GCAGACGTAC CTGAAGGATC ACGACACGAA CGGCCTCGAC ATCCAGATCA TGTCGCAGGT TCGCGCAATG CGTTACACGC TGGAGCGTGT GATCCGCGGT CTGGACACCA TCTCGGTGAC GGGCAACATC CTGCGCGACT ACCTGACCGA CCTGTTCCCG ATCATGGAAC TGGGCACGTC GGCGAAGATG CTGTCGATCG TACCGCTGAT GGCGGGCGGC GGCATGTACG AGACGGGTGC GGGCGGTTCG GCACCGAAGC ACGTCAAGCA GCTGGTCGAA GAAAACCACC TGCGCTGGGA TTCGCTGGGC GAGTTCCTCG CGCTGGCCGT GTCGCTGGAA GAGCTGGGCA TCAAGACGGG CAACAACAAG GCGAAGGTGC TGGCGAAGAC GCTCGACGCT GCGACGGGCA AGCTGCTCGA CAACAACAGG AGCCCTTCGC CGAAGACGGG TGCGCTCGAC AATCGCGGCA GCCAGTTCTA CCTCGCCATG TACTGGGCGC AGGAACTGGC CGCGCAGACG GACGACGCGG AACTCGCCGC GAAGTTCGGC CCGCTCGCCA AGGTATTGAC TGACAACGAA GCGACGATCG TTGGCGAACT GACGGACGTG CAGGGCAAGG AAGTCGACAT CGGCGGTTAT TACAAGCCGG ACTTCGCGAA GCTCGAAGCG GTGATGCGTC CGAGCAAGAC GCTCAACGCC GCGCTGGCTG CCGTGACGGC GTAA
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Protein sequence | MSNKQPTIIY TLTDEAPLLA TSAFLPIIRT FTSPAGVNVE TSDISVASRI LGEFPEFLTE EQRVPDNLAE LGRLTQDPDT NIIKLPNISA SVFQLVSAIK ELQSKGFKVP DYPEDPKNEE EKAIQKRYSK CLGSAVNPVL REGNSDRRAP AAVKNYAKKH PHSMAEWSMA SRTHVAHMKH GDFYHGEKSI TNDKAREVRM ELVTKRGETI VLKPKVSLQE GEIVDSMFMS KKALVEFYED QMEDAHKTGV MLSLHVKATM MKVSHPIVFG HAVKVFYKDA FAKHQKLFDE LGVNVNNGLV DLYTKIEALP ESQREEVIRD MHACHEHRPA LAMVDSAKGI SNLHAPNDVI VDASMPAMIR AGGKMWGADG RPADTKCLIP ESTFARIYQE IINFCKTNGA FDPRTMGTVP NVGLMAQKAE EYGSHDKTFE IKEDGEARIV DNATGEVLTA LTQPVEQGDI WRMCLVKDAP IRDWVKLAVT RARNSGTPAV FWLDPYRPHE NELIKKVQTY LKDHDTNGLD IQIMSQVRAM RYTLERVIRG LDTISVTGNI LRDYLTDLFP IMELGTSAKM LSIVPLMAGG GMYETGAGGS APKHVKQLVE ENHLRWDSLG EFLALAVSLE ELGIKTGNNK AKVLAKTLDA ATGKLLDNNR SPSPKTGALD NRGSQFYLAM YWAQELAAQT DDAELAAKFG PLAKVLTDNE ATIVGELTDV QGKEVDIGGY YKPDFAKLEA VMRPSKTLNA ALAAVTA
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