| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5411 |
|---|
| Symbol | |
|---|
| ID | 6246895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2554518 |
|---|
| End bp | 2555270 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642597131 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001861534 |
|---|
| Protein GI | 186474192 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.746518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA CGAGCGCGCT GACCTTGCAC GACAGGACCA CGGCCGCCGG CGTGCGCGCA
CTGCGCATCG CCACCTGGAA CATCCACGGC ACGGTCGGGA CCGACAGGTT CGCGTCGCCG
GAGCGGATCG GCCGCGTGAT CCGCGAACTC GACGCGGATA TCGTCGCGTT GCAGGAAGTG
CCGCTAGGCG GGAGTTTTGC GCCGAGCGCA CTGCCCGTCT TGCGCGAGAT GACAGGGATG
GACGCCATCG CGGGGCCCAC GCTCGATACG CCCGAACGCC GCTATGGCAA CGCGATCCTG
AGCCGCCTGC CCATCTGCGC GACGCGTGCG CTCGATCTGT CGTTCGGCAC GCGCGAAGCG
CGCGGCGCGC TCGATGTCGA CGTCGAAACG GACGGCCCCG GCACGGCGCT GCGCGTCGTC
GCGACGCATC TGGGACTGTC GGCGCGGGAA CGGCGCGCGC AGATCCGCGC GCTGATTGCC
GCTTTCGATA CGGCGCGCAT GCCCGTCCTG CTGATGGGCG ACATCAACGA ATGGTTCGTG
TGGGGCCCGG CGCTGCGCAT GCTTGTCACC CATTTTCGGG CGGCGCCTGC GCCGCGCACG
TTCCCTTCGC GCCTGCCCGT GTTCGCGCTC GACCGCATCT GGATGCACCC CGTCGACCGA
CTGCTCGACG TGCATGTGCA CAGCAGCATG CTGGCGCGCG TTGCCTCGGA TCATTTGCCA
CTGGTCGCGC GCATCGCGCG AGAGCATTAT TGA
|
|---|
| Protein sequence | MNDTSALTLH DRTTAAGVRA LRIATWNIHG TVGTDRFASP ERIGRVIREL DADIVALQEV
PLGGSFAPSA LPVLREMTGM DAIAGPTLDT PERRYGNAIL SRLPICATRA LDLSFGTREA
RGALDVDVET DGPGTALRVV ATHLGLSARE RRAQIRALIA AFDTARMPVL LMGDINEWFV
WGPALRMLVT HFRAAPAPRT FPSRLPVFAL DRIWMHPVDR LLDVHVHSSM LARVASDHLP
LVARIAREHY
|
|---|
| |