| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5392 |
|---|
| Symbol | |
|---|
| ID | 6246877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2536581 |
|---|
| End bp | 2537282 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642597113 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_001861516 |
|---|
| Protein GI | 186474174 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.24118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.324475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCACG ACGCGCCTGA CGTCGCGAGC GCGACCGTGC GCATCGACGA CTGCTGGAAT
CGCATCGGCA CGCGCGGCGA CAACACGTGC CCGCGCCTCG CCGACTATTC GCGCTGCCTG
AATTGCCCCG TATTCGCGCA ACGCGCGGCG CGATTGCTCG ACCGGCCGTT GAGCGACGCG
GACGTCGCGC CGCGTCGGCA CGCTGGCGAA GTGAGCGGCG TTGCCCCTGC CGAAGACACC
GCGACGGATT CGGCGCTCGC CTTCCGCATC GCGGGTGAAT GGCTCGCACT GCCGACCCGC
GTGCTGCGCG AAGTCGACGC TATCCGCGCG ATCCATTCGC TGCCTCATCA GCGTTCGCGC
GCAGTGCTCG GCATCGTCAA CGTGCGCGGC GCGCTGACCC TCGCGGTCTC GCTCGGCGAA
CTGCTGAACA TGGAGCCGGC CGCACACGCA CAAGCGGTTG CGCGCAACGG CCACGCGCGC
ATGCTGGTCG CCGCGCATGA CAGCGAGCCG CCCGTCGCGT TTCCCGTCGA TGAAGTGGAA
GGCGTGATCC GTTATGCCGA TGCCACGCTC CTGCCCGTGC CCGCGACGCT CGCGCACGCT
ACCGCATCGC ATGCGCGCGG CGTGCAGGTG TGGCGCGACC AGGCCATCGG CGTGCTGGAC
CCCGCGCGTC TGTTCGACTC GATCGCCCGG AGCCTGCGAT GA
|
|---|
| Protein sequence | MLHDAPDVAS ATVRIDDCWN RIGTRGDNTC PRLADYSRCL NCPVFAQRAA RLLDRPLSDA
DVAPRRHAGE VSGVAPAEDT ATDSALAFRI AGEWLALPTR VLREVDAIRA IHSLPHQRSR
AVLGIVNVRG ALTLAVSLGE LLNMEPAAHA QAVARNGHAR MLVAAHDSEP PVAFPVDEVE
GVIRYADATL LPVPATLAHA TASHARGVQV WRDQAIGVLD PARLFDSIAR SLR
|
|---|
| |