Gene Bphy_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5392 
Symbol 
ID6246877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2536581 
End bp2537282 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID642597113 
ProductCheW protein 
Protein accessionYP_001861516 
Protein GI186474174 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.24118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.324475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCACG ACGCGCCTGA CGTCGCGAGC GCGACCGTGC GCATCGACGA CTGCTGGAAT 
CGCATCGGCA CGCGCGGCGA CAACACGTGC CCGCGCCTCG CCGACTATTC GCGCTGCCTG
AATTGCCCCG TATTCGCGCA ACGCGCGGCG CGATTGCTCG ACCGGCCGTT GAGCGACGCG
GACGTCGCGC CGCGTCGGCA CGCTGGCGAA GTGAGCGGCG TTGCCCCTGC CGAAGACACC
GCGACGGATT CGGCGCTCGC CTTCCGCATC GCGGGTGAAT GGCTCGCACT GCCGACCCGC
GTGCTGCGCG AAGTCGACGC TATCCGCGCG ATCCATTCGC TGCCTCATCA GCGTTCGCGC
GCAGTGCTCG GCATCGTCAA CGTGCGCGGC GCGCTGACCC TCGCGGTCTC GCTCGGCGAA
CTGCTGAACA TGGAGCCGGC CGCACACGCA CAAGCGGTTG CGCGCAACGG CCACGCGCGC
ATGCTGGTCG CCGCGCATGA CAGCGAGCCG CCCGTCGCGT TTCCCGTCGA TGAAGTGGAA
GGCGTGATCC GTTATGCCGA TGCCACGCTC CTGCCCGTGC CCGCGACGCT CGCGCACGCT
ACCGCATCGC ATGCGCGCGG CGTGCAGGTG TGGCGCGACC AGGCCATCGG CGTGCTGGAC
CCCGCGCGTC TGTTCGACTC GATCGCCCGG AGCCTGCGAT GA
 
Protein sequence
MLHDAPDVAS ATVRIDDCWN RIGTRGDNTC PRLADYSRCL NCPVFAQRAA RLLDRPLSDA 
DVAPRRHAGE VSGVAPAEDT ATDSALAFRI AGEWLALPTR VLREVDAIRA IHSLPHQRSR
AVLGIVNVRG ALTLAVSLGE LLNMEPAAHA QAVARNGHAR MLVAAHDSEP PVAFPVDEVE
GVIRYADATL LPVPATLAHA TASHARGVQV WRDQAIGVLD PARLFDSIAR SLR