Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5345 |
Symbol | |
ID | 6246830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 2485065 |
End bp | 2486585 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642597066 |
Product | transcriptional regulator |
Protein accession | YP_001861469 |
Protein GI | 186474127 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0493543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGTG CGACCGAAAT CGACCTTGCG CTGAACGAGC GTCCCGACGG CATGGCGCTA CAGCGCTGGC TCTACGGCGA ATTGCGCGCG GCGATTCTGC AGGGACGGCT CGGGCCGGGC GCGCGCCTGC CCGCCACGCG CGATCTCGCC GCGCGTCATG GCGTCTCGCG CGGCACGGTG CTGGGCGTAT TTGCGCAGCT CGCGGCGGAA GGCTATCTGT CGGGTGCCGT CGGGCGGGGC AGTTTTGTCG CCAGCGAATT GCCTGATGGA CGTTTCGACG CTGCACCCGC GTCCGAGGCG CCGCGGCTCG CGCGCCGCAA GGCAGGGGCG CGCGACACGG CGAAGGCAGA GATCGGCCTT TCCGCGCGCG GGCGCTTGTT GGCGCGCAGC GCGTTCGCCG TCGACGGCCG CTCGTTTCCC TCGCGCGCGT TTCGACCGAG CCAACCCGAC TTGCAGTCGT TTCCCTTCGC GTTGTGGGCG CGCGTCGCGG CGCGCCGTTC GCGGCTCCTG AACCGCTCGA TGCTCGCCGA CGGCGAAGCG CAAGGCTATC GTCCGTTGCG CGAAGTCATC GCCGAGCACG TTCGCGTGAC GCGCGGCATC GCGTGTGCAG CGGACCATGT AGCCATTGTT GGCAGCGCAC AGCAGGTGAT CGATCTTGCC GCGCGTCTGT GGCTCGACCC CGGCGACGCC GCATGGATGG AAGATCCGGG TTATCAGGGC GCGCGGCTCG TGCTCGAAGC GGCGGGTGCG CGCATCGCCG CTGTTCCCGT CGACGCGCAC GGCATCGACG TGGCCGAGGG GCAGCGGCTC GCGCCCGCTG CGAGACTCGC GTATGTGACG GCCGGACGTC AGGCGCCGCT GGGCCCGGCG CTATCGCTCG AGAGGCGGCT CGCGCTGCTC GACTGGGCGC ACACACGTGG CGCGCTCGTG ATCGAGGACG ACTACGACAG CGAGTATCGC TTCGAAGGGC GCCCGCTCGC GGCGTTGAAA AGCCTGGATA ACGCCGGTCA TGTGATCTAT TGCGGGACGT TCAGCAAGCT GCTGTTTCCG GCACTGCGTA TCGCGTATGC GGTGCTGCCC GAGCGGCTCG TCGAGCCGTT TGTCGCCGCA TGGTCGCTGA CAGGACGGCA CGTGCCCCTC GATCAGCAGG CGACGCTGCA CGCGTTCATC GCGGAAGGGC ATGTGGGCCG TCATGTGCGG CGCATGCGCG AACTGTATGG CGAGCGTGCC GAGGCGCTGC GCGAAGCGGC ACGCCGGCAT TGGACGGGGC TGCTCGCGCT GCCCCCCATC GTTGCCGGGC TCGATGCGCC CGCGTTCCTG CCCGTAGGCG CGGACGATGC GCTCGCTGCG CGCGTTGCCG CGCAAGCAGG CATCGAGACG CGCCCGTTGT CGTCGTATGC GGTCGGGCAT GCGGCGCCCG CAGGGTTGGT GCTCGGATTC GCCAGCATCG GCGTCGACGA TATCGACGCG GGTGCGCGAA CCCTTGCTCG CGTGCTGCAG GCCATGCTCT ACAAAACGTG A
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Protein sequence | MRRATEIDLA LNERPDGMAL QRWLYGELRA AILQGRLGPG ARLPATRDLA ARHGVSRGTV LGVFAQLAAE GYLSGAVGRG SFVASELPDG RFDAAPASEA PRLARRKAGA RDTAKAEIGL SARGRLLARS AFAVDGRSFP SRAFRPSQPD LQSFPFALWA RVAARRSRLL NRSMLADGEA QGYRPLREVI AEHVRVTRGI ACAADHVAIV GSAQQVIDLA ARLWLDPGDA AWMEDPGYQG ARLVLEAAGA RIAAVPVDAH GIDVAEGQRL APAARLAYVT AGRQAPLGPA LSLERRLALL DWAHTRGALV IEDDYDSEYR FEGRPLAALK SLDNAGHVIY CGTFSKLLFP ALRIAYAVLP ERLVEPFVAA WSLTGRHVPL DQQATLHAFI AEGHVGRHVR RMRELYGERA EALREAARRH WTGLLALPPI VAGLDAPAFL PVGADDALAA RVAAQAGIET RPLSSYAVGH AAPAGLVLGF ASIGVDDIDA GARTLARVLQ AMLYKT
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