Gene Bphy_5299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5299 
Symbol 
ID6246784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2435054 
End bp2435602 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID642597020 
Producthypothetical protein 
Protein accessionYP_001861423 
Protein GI186474081 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0560052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.052078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC GCCCATACCG CTCATTCCGC TCATTGCTTC GAGCCTGCGC GCTGCCTGCC 
GCCATCGCGC TCGGCGCGGC GGCGTGCCTG CCCGCGAGCG CGCAGACGCA GCTTTCGCCG
GGCGACACGC AGTTTGCGCA GGATGCGTCG CAGGCGGGCG CGACGGAGAT CGCAGCGAGC
AAGCTCGCGC TGTCCAGTTC GTCGAACGCG CAGGTGAAGA AGTTCGCTCA GCAGATGATC
GCGGATCATA CAAAGCTCGC GCGCAGCCTC GACGTCGTCG CAACGCAAAA GGGCCTCGGC
AAGTCGCCGG GCGCGGACTC CGCGCTGATC GGCAAGCTAC AGGGTTTGAA GGGCGACGAC
TTCGACAAGC TCTATATCGA TGAGGTCGCG GTGAGTGGCC ACCAGAAGGC CGTCGAACTG
TTCCAGAAAG AAAGCGAAAG CGGGACCGAT GCGCAACTGA AGGCTGCGGC GACGCGCGCG
CTGCCGACTA TCCGCCACCA CCTCGCGATG GCCCAGCAAC TTGCCAATGC ACGCAAGGCT
TCGTCATGA
 
Protein sequence
MIIRPYRSFR SLLRACALPA AIALGAAACL PASAQTQLSP GDTQFAQDAS QAGATEIAAS 
KLALSSSSNA QVKKFAQQMI ADHTKLARSL DVVATQKGLG KSPGADSALI GKLQGLKGDD
FDKLYIDEVA VSGHQKAVEL FQKESESGTD AQLKAAATRA LPTIRHHLAM AQQLANARKA
SS