| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5113 |
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| Symbol | |
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| ID | 6246607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2215530 |
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| End bp | 2218928 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642596843 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001861246 |
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| Protein GI | 186473904 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.302627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00736765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCT TGTCCAGCGC CCTTTCGGCG ATGAAGGACC ATTACGAGGT GGTGGTGGTG
GGTTCCGGCT ATGGCGGCGC GATTGCCGCA AGCCGCATGG CACGTGCGAA ACGCAGCGTG
TGCCTGCTTG AGCGCGGGCG CGAGTTCATG GCGGGCGATT TTCCCGCCAC ACAACTCGAA
GGTGTCGCGC AGGTGCAGTA CAACACGAGC GTCGCCCAGA TCGGCTCGCC GCTCGCGCTG
CTCGAAGTGC ATGTGAACCC GGATGCAAAC GTCGTGGTCG GCTGCGGACT CGGCGGCACC
TCGCTGATCA ACGCGAACGT CGCTCTCAAG CCCGACGCAC GCCTTTGGGA CGACCCGCGC
TGGCCCGCCG CCGTGCGCGC GGACCAGGCG AATCTGGAGC TGTGCTACGC GCGAGCAACG
ACAATGCTCG GCGCGACGCC CGTCCCCGAC GACTATCCCG ATCTGCCGAA ACTCGACGCT
CTGGAGTTGT CCGCGAAACG GCTCGATATG AGCAACCGTT TCTACCGTCC GCCCATCACC
GTGACGTTCA AGGACGGCAA GAACGCGGCG GGTGTCGACC AGAAGCGCTG CAACGGCTGC
GGCGACTGCA ACTCGGGCTG CAATCACGGC GCGAAGAACT CGACGCACAT GAACTATCTG
CCCGACGCCG TCGCGCACGG CGCGCAGATT TTCACGGGCG CGGCCGTGCA TTCGGTGGTG
CGCGACGAGA AGCGAGGGGT CTGGTGCGTG CGCTATCAGC CTGCCGATCT CAAGCGCGAA
CTGTACGACG CACCGGAAAT GTTCGTGACA GCCGATATCG TGATTCTTTC CGCGGGCACG
CTGGGCTCGA CCGCGATCCT GCTGCGTTCG GCTCAGGCCG GCCTATCCGT GTCGACGCAG
CTCGGCAAGC ACTTCACGGG CAACGGCGAC GTGCTCGCGT TCGCGTTCAA CACCGATAAG
GTGATCAACG GCGTCGGCTG GGGTACGCAT CCCGCAGGCG ACATTCCGCC CGTCGGCCCG
TGCATCGCGG GCATCATCGA CCATCGCGAC ACGCCGAACG TGAAGGACGG CTTCGTGATC
GAAGAAGGCT CGATCGCGTC ACCAATCGGC CTCGGCCTGA TGGGCGTGCT CGGCGTCGCG
GCGCCCGCCG AAGGCGTCGA GATGCCGGAT CCGGAAGGCG AGCCGCTGCT CGCGGACGAA
GCGCGTATCG CCGAGAGCAT CCTGCGCGGC CCGCATCACG GCGCGATGCG CAACACGCAG
ACATGGCTGG TGATGGCGCA CGACGACGAA AGCGGCCAGA TCACCGTCGA AGATGGCCGG
CCGCGCGTGA GCTGGCCGAA CGCGGGCAAG CAGCCGATCT ACGAGACCGT CGAAAAGACG
CTGATCGAAG CCACCAGCGC GCTGGGCGGC TCGTACGTGC GCAATCCGAT CTCGAGCGAC
ATGTTTCAGA ACCGCACCGT CACCGTGCAT CCGCTGGGCG GCTGCGGGAT GGCGGACGAT
GCGGCGCATG GCGTCGTCGA TCAGGCGGGC CGTGTGTTTT CCGGCGTGCA GGGCAACGCG
GTGCACGAGG GGTTGTACGT GATGGACGGG GCGGTGATGC CGCTCTCGCT CGGCGTGAAC
CCTCTGCTGA CCATTTCGGC CCTCGCCGAG CGCAATTGTG AGCAACTTGC GCAGTCGCGC
GGCTGGCAGA TCGACTATGA CTCCGCAGGC AACACGGCGC CGCCGCCGGC GCCGAAGATC
GGCCTGCGCT TCACCGAGAC GATGATCGGC ACGTTTTACG CAGGTGACGT CAAACCGGAA
GGCCAGCAGG ACAACCGCGC TGAAGGCACG CCCATCAGCT TCACCGTGAC CGTCGTATCC
GACGATCTCG ACGACATGCT CGCGAACCGC CAGCATCAGG CGCATATGAT CGGCACGCTG
ACCTGCACCG CGCTGTCGCC CCAGCCCATG ACCGTAAACG ACGGCATCTT CAACCTGTTC
GTCGTCGATG AAACGAATGT CGACCGGCGC AACATGAACT ACCGGATGAC GCTCGATACC
GTCGACGGCA AGCATTTCTA TCTGACCGGT CAGAAGATCA TCACGCATAC GTCGCTGACG
GAATTATGGA CGCAAACCAA TACGCTCTAC GCAAAGGTGC GCGAGTCCGC TGCCGATGAC
GCGCCGGTAA TCGGCCACGC GACACTCGTC ATCACGCCGG AGAACTTTCT CAAGCAGCAG
CGCACGATTG AAGTGACGAA CGCGCCCGAC GTCGAAACGC GCCTCGCCTA CACGCTGAAA
TTCGGCCGTT TCTTTGCAGG CGTGCTTTAC ACGGAATACG GCGGCGTCGC CGCGCCATTG
CAGTACTTCG ACCCCGATGC CCCGCCGCGC ATGCGCCGCA CGTTGCGCGC GCCCGCGCCG
CAGATCACCT ACTTCGATAC CGAGGACGGC AAGACGCTGC GGCTTGCGCG CTATCACGGC
GGCGACAAAG GGCCGTTGCT GCTCATTCAC GGTTCGGGCG TATCGAGCCG CATCTTTTCG
ACCGACCTGA TCGGCACGAA TCTCGTCGAG TTCCTGTGCG CCGCGCATTA CGACGTGTGG
CTTGTCGATC TGCGCGTGAG CATCGAACTG CCGAGCGCCA CTGAACGCAC TACGGCCGAC
GACATCGCGC GCTACGACAT ACCCGCTGCC GTCGCCAAGG TGCGCGAGTT GACGGGCGCC
GATCAGATCC AGGTATTCGG CCATTGCCTG GGCGCGCTGG CGTTCAGCAT GTCGCTGATG
TCGGGGCTGA AGGGCGTGCG TTCCGCCGTA CTGTCGCAAG TCTCCGCGCA TCCTGTGCCG
GGACTGTTGC AGCGGATCAA GGCGGGGCTG CACACACCGC AGATCCTCCA GCATCTTGGA
GTCAAGGACA TGACCGCTTA CACGCGGCAC GAAAAGTGGC CGCACAATCT GCTCGACGAA
GCACTGAAGT TCTTCCCCGT CGGGCACGAC GAATCCTGCG ACAGCCCGGT GTGCCATCGC
GCGACGTTCC TGTATGGGCT GCTGTATGAG CACGCGCAGC TCGACGAAAG GCTGCATGCG
AATCTGCAGG AGCTATTCGG TATTCACGAT GTCGAGCTGT TCAACCAGCT CGCTGCGATG
GTGCGCGCGG GGCATGTCGT GGACGCGAAT GGCGACGATG TCTATCTGCC TAACCTCGAC
GGCATGAAGC TGCCGATCGC GTTTATTCAC GGGACGGAAA ATCTCTGCTA TCTGCCCACC
AGCACGGAGA TGACGTACGA CCTGCTCGTC GAGCGTTTCG GGCCCGACAA CTATGAGCGG
CATCTGATCG AAGGCTATGG ACACATCGAT TGCGTGTTCG GGAAACGCGC GGCGCTCGAT
GTGTTTCCGA CCATCGTCAG GCATCTGGAT GCGCACTGA
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| Protein sequence | MNRLSSALSA MKDHYEVVVV GSGYGGAIAA SRMARAKRSV CLLERGREFM AGDFPATQLE
GVAQVQYNTS VAQIGSPLAL LEVHVNPDAN VVVGCGLGGT SLINANVALK PDARLWDDPR
WPAAVRADQA NLELCYARAT TMLGATPVPD DYPDLPKLDA LELSAKRLDM SNRFYRPPIT
VTFKDGKNAA GVDQKRCNGC GDCNSGCNHG AKNSTHMNYL PDAVAHGAQI FTGAAVHSVV
RDEKRGVWCV RYQPADLKRE LYDAPEMFVT ADIVILSAGT LGSTAILLRS AQAGLSVSTQ
LGKHFTGNGD VLAFAFNTDK VINGVGWGTH PAGDIPPVGP CIAGIIDHRD TPNVKDGFVI
EEGSIASPIG LGLMGVLGVA APAEGVEMPD PEGEPLLADE ARIAESILRG PHHGAMRNTQ
TWLVMAHDDE SGQITVEDGR PRVSWPNAGK QPIYETVEKT LIEATSALGG SYVRNPISSD
MFQNRTVTVH PLGGCGMADD AAHGVVDQAG RVFSGVQGNA VHEGLYVMDG AVMPLSLGVN
PLLTISALAE RNCEQLAQSR GWQIDYDSAG NTAPPPAPKI GLRFTETMIG TFYAGDVKPE
GQQDNRAEGT PISFTVTVVS DDLDDMLANR QHQAHMIGTL TCTALSPQPM TVNDGIFNLF
VVDETNVDRR NMNYRMTLDT VDGKHFYLTG QKIITHTSLT ELWTQTNTLY AKVRESAADD
APVIGHATLV ITPENFLKQQ RTIEVTNAPD VETRLAYTLK FGRFFAGVLY TEYGGVAAPL
QYFDPDAPPR MRRTLRAPAP QITYFDTEDG KTLRLARYHG GDKGPLLLIH GSGVSSRIFS
TDLIGTNLVE FLCAAHYDVW LVDLRVSIEL PSATERTTAD DIARYDIPAA VAKVRELTGA
DQIQVFGHCL GALAFSMSLM SGLKGVRSAV LSQVSAHPVP GLLQRIKAGL HTPQILQHLG
VKDMTAYTRH EKWPHNLLDE ALKFFPVGHD ESCDSPVCHR ATFLYGLLYE HAQLDERLHA
NLQELFGIHD VELFNQLAAM VRAGHVVDAN GDDVYLPNLD GMKLPIAFIH GTENLCYLPT
STEMTYDLLV ERFGPDNYER HLIEGYGHID CVFGKRAALD VFPTIVRHLD AH
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