Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5088 |
Symbol | |
ID | 6246582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 2191467 |
End bp | 2192249 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642596818 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001861221 |
Protein GI | 186473879 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.104666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0604229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACG CAACCGATGG TTTTCCCCTG GCCGGCGCCC CCGGCGCGCC CCTGCTGCCG ACGGTGCATG AGCCGCGGTC AAGCACTTCG CGTGTGATCG CGGAAGCGCT GCGCTCGGCG ATCGTCGAAG GCACGCTCGC GCCCGGTGCG CCGCTGCGCC AGGACGCGAT TGCGCGCCAC TTCTCGGTTA GCGCGATTCC CGTGCGGGAA GCGTTGCGGC AGCTGGAAAG CGAAGGCTGG GTGAAGGTCG AGTTGAACAA GGGCGCGAGC GTCGCCCGGC TCACGCCGGC CGAAGCGCGC GAGATCTACG AGATCCGCTC CGCGCTCGAG AGCCTCGCGA TTTCGCTGGC GATTCCGAAT CACACGCCCG ACTCGCTGCG CGAGGCGGCC GCACTGTGCA AAGCCGCCGA AAGCGAGCCG GACCCGGCGC TGTACGTCGC CCGCAACGAG GCGTTCCACA CCTGCCTGTA TGCGCCCGCC AATCGACCGC AACTCGCCGA GATGATCGCG GCGCTGCACC GGCGCGGCGA GCGCTATCTG AGGCTGAAAT TCGGCTTGCC CGCCTACAAG GGCGAGTCCG ACGCCGAACA CCTGGCGATC CTTGCCGCCG TCGAGCGCAA GGACGTCGCC GTCGCCCAGT CGCTCATCTC GGCTCACCTG CTGGGCACGG GCGAACTGGT CTACCGTTTC TTGACGGAAC GCGCGCAAGC AGAAGCCGCC GCGGCCGCGC CGCGCAGAAA GCGCGGGCGG CCGGCGCGCA CTCCAACCAC TATCGGGAGT TGA
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Protein sequence | MDNATDGFPL AGAPGAPLLP TVHEPRSSTS RVIAEALRSA IVEGTLAPGA PLRQDAIARH FSVSAIPVRE ALRQLESEGW VKVELNKGAS VARLTPAEAR EIYEIRSALE SLAISLAIPN HTPDSLREAA ALCKAAESEP DPALYVARNE AFHTCLYAPA NRPQLAEMIA ALHRRGERYL RLKFGLPAYK GESDAEHLAI LAAVERKDVA VAQSLISAHL LGTGELVYRF LTERAQAEAA AAAPRRKRGR PARTPTTIGS
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