Gene Bphy_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5088 
Symbol 
ID6246582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2191467 
End bp2192249 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID642596818 
ProductGntR family transcriptional regulator 
Protein accessionYP_001861221 
Protein GI186473879 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.104666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0604229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG CAACCGATGG TTTTCCCCTG GCCGGCGCCC CCGGCGCGCC CCTGCTGCCG 
ACGGTGCATG AGCCGCGGTC AAGCACTTCG CGTGTGATCG CGGAAGCGCT GCGCTCGGCG
ATCGTCGAAG GCACGCTCGC GCCCGGTGCG CCGCTGCGCC AGGACGCGAT TGCGCGCCAC
TTCTCGGTTA GCGCGATTCC CGTGCGGGAA GCGTTGCGGC AGCTGGAAAG CGAAGGCTGG
GTGAAGGTCG AGTTGAACAA GGGCGCGAGC GTCGCCCGGC TCACGCCGGC CGAAGCGCGC
GAGATCTACG AGATCCGCTC CGCGCTCGAG AGCCTCGCGA TTTCGCTGGC GATTCCGAAT
CACACGCCCG ACTCGCTGCG CGAGGCGGCC GCACTGTGCA AAGCCGCCGA AAGCGAGCCG
GACCCGGCGC TGTACGTCGC CCGCAACGAG GCGTTCCACA CCTGCCTGTA TGCGCCCGCC
AATCGACCGC AACTCGCCGA GATGATCGCG GCGCTGCACC GGCGCGGCGA GCGCTATCTG
AGGCTGAAAT TCGGCTTGCC CGCCTACAAG GGCGAGTCCG ACGCCGAACA CCTGGCGATC
CTTGCCGCCG TCGAGCGCAA GGACGTCGCC GTCGCCCAGT CGCTCATCTC GGCTCACCTG
CTGGGCACGG GCGAACTGGT CTACCGTTTC TTGACGGAAC GCGCGCAAGC AGAAGCCGCC
GCGGCCGCGC CGCGCAGAAA GCGCGGGCGG CCGGCGCGCA CTCCAACCAC TATCGGGAGT
TGA
 
Protein sequence
MDNATDGFPL AGAPGAPLLP TVHEPRSSTS RVIAEALRSA IVEGTLAPGA PLRQDAIARH 
FSVSAIPVRE ALRQLESEGW VKVELNKGAS VARLTPAEAR EIYEIRSALE SLAISLAIPN
HTPDSLREAA ALCKAAESEP DPALYVARNE AFHTCLYAPA NRPQLAEMIA ALHRRGERYL
RLKFGLPAYK GESDAEHLAI LAAVERKDVA VAQSLISAHL LGTGELVYRF LTERAQAEAA
AAAPRRKRGR PARTPTTIGS