Gene Bphy_5085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5085 
Symbol 
ID6246579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2188502 
End bp2188807 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content68% 
IMG OID642596815 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_001861218 
Protein GI186473876 
COG category 
COG ID 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.241533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.113374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA TGACATTCGA CTATCCGGCG CAACGCGCGA TCACGGCGCG CGCGCATGTA 
GGCGTCGTCG GATCCGGCGA CCTTGAGGTG CTGCTGGCGC CCGCCGGCGC GATGAAGGCG
ACCGTGACCG TGCGCACCAG CGTCGATGGC TACGGGCACA TCTGGAAGAG CGTGCTGGAC
CGCTTTTTCA CGCGCTACGA CGGCGCGGCG CAGATCGAGA TCAACGACTT CGGCGCGACG
CCCGGCGTCG TGGCACTGCG GCTCGCAGAG GCCGTCGAAG CGGCAGACCA GGGAGCAGGC
GCATGA
 
Protein sequence
MEQMTFDYPA QRAITARAHV GVVGSGDLEV LLAPAGAMKA TVTVRTSVDG YGHIWKSVLD 
RFFTRYDGAA QIEINDFGAT PGVVALRLAE AVEAADQGAG A