Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5005 |
Symbol | |
ID | 6246502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 2102309 |
End bp | 2103304 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642596734 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001861141 |
Protein GI | 186473799 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.081564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG CCGTTGTCAT CTTCGATGGA GTGCAGGCCC TGGACGTCGC AGGCCCTCTC GACGTCTTCG CGGAAGCGAA CACGTTTATT CCCGCGCATC AGCGATATCA AGTCTCTTTT GTAGGCTACG AAGCGGGCAC AGTATCGGCC TCCAACGGGA TGCAAATCGC CGTGCCGTTC GGCTATCAGG ACTTCGACAC GCAATGCGAT TTGCTGCTGA TCGCAGGCGG GCCGCAGTTG CCCGATTTTC AGCCGCCGCG CGCATTTCTC GACTGGCTGA CGCGTCAGGC AAACTGCGCC GCCAGATACG GCTCCGTCTG TAATGGCGCG TTCCTCCTCG CCCATGCGGG ACTGCTCGAC GGCCGCGAAG TGACGACCCA CTGGTCCGAT GCGGGCCGGT TGGCCGACGA CTTCCCTCAA GCATGCGTGC AGCCGGACCG CATATTCATC CGCGACGGCC GCCTGTTCAC GTCAGCGGGC GTCACAGCGG GTATCGATCT GTGCCTGTCG CTGGTGGCCG AGGACTGGGG ACATGAACTG GCCGTGCGCG TCGCGAAACG GCTTGTTGTC TATATCCAGC GTGAAGGCGG GCAGTCGCAA TACAGCCCTT ACGTGGGCGT GCGCAGGGAT GAAGACCCGA TCATTGGCAA GGTGCAACGT TACGTGATGG ACCACATCAC CGACGTGCTT TCGATCGAGC AACTCGCGAG CGCCGTGTCC GTCAGCCGGC GCACGTTCTC GCGTCTCTTC GCCAAATATG CGAAGGTGAC CCCGTCGGCA TTCGTCGAAC AGGTTCGGGT CGATACGGCG AGAAAGCTGC TCGAAGAAAC CGACGCGCCA CTGAAGACGG TCGCATTCAA GTGTGGCTTT CACAGCGCCA CGCATATGCG GACCACGTTC GCGCGGCGGC TCAACGTGAC GCCGAAACAG TATCGGCAGC GCTTTCGTGG TGCGGTACCG GAGCCATCGT TGACGCTCGA TGCCGTTAGC GATTGA
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Protein sequence | MKVAVVIFDG VQALDVAGPL DVFAEANTFI PAHQRYQVSF VGYEAGTVSA SNGMQIAVPF GYQDFDTQCD LLLIAGGPQL PDFQPPRAFL DWLTRQANCA ARYGSVCNGA FLLAHAGLLD GREVTTHWSD AGRLADDFPQ ACVQPDRIFI RDGRLFTSAG VTAGIDLCLS LVAEDWGHEL AVRVAKRLVV YIQREGGQSQ YSPYVGVRRD EDPIIGKVQR YVMDHITDVL SIEQLASAVS VSRRTFSRLF AKYAKVTPSA FVEQVRVDTA RKLLEETDAP LKTVAFKCGF HSATHMRTTF ARRLNVTPKQ YRQRFRGAVP EPSLTLDAVS D
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