Gene Bphy_4989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4989 
Symbol 
ID6246486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2086126 
End bp2086824 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content60% 
IMG OID642596718 
ProductGntR family transcriptional regulator 
Protein accessionYP_001861125 
Protein GI186473783 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.06037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGA AGTCACTACC GGCGGAAACA CGCAAGCGGA TCAGCCTGCG CGGCACGGGT 
ATGTACGCGG CCATCGCGGA GCGATTGCGC GAGATGATTC TCGAAGGTGA ATTGCCGCCG
GGCACGCATA TCGACGAAAA AGCACTGTGC GAACAGTTCG ACATTTCAAG AACGCCTTTG
CGCGAGGCGC TCAAAACGCT GGTGACCGAG GGGCACGTGA CCCACCGGCA GCACATGGGT
TTTCAGGTTG CGCCGATCAA CAGGGACGAG ATTGCCGCCA TCTTCGAAGT GCTGCATGGA
CTGGAGGAAA CGGCTGGAAG GCTTGCCGCG ACGCGCATCG ACGATAAGCA GATGAAGGCG
CTGCTGGAGC GTCATCGCAC CATGGAGGCG TATCACCGCG AGGGCAAACG GACGGCCTAC
TACCGCGCCA ATCAGAAGGT CCATCAGCAC ATCGTTGATG TTGCCGGCAA TCCCGTGCTC
TCCGACCTGT ACTCATCGTT GATGAGCAAG ATCCATCGCG CGCGAGGCGC GGCCAATGCG
GATGTGCTGC GCTGGGCCGA GTCTCTAGGC GAACACAGCG AGATACTGGA GGCACTGGCA
AAGCGCGATG GAGCATGTCT CGCCCGGTTG CTGCGCGAAC ACTCGGAGCA CACGGCAGCA
GAAGTGATGA AAGTGCTGGA TGCCACGAGT GGGAAGTAG
 
Protein sequence
MDMKSLPAET RKRISLRGTG MYAAIAERLR EMILEGELPP GTHIDEKALC EQFDISRTPL 
REALKTLVTE GHVTHRQHMG FQVAPINRDE IAAIFEVLHG LEETAGRLAA TRIDDKQMKA
LLERHRTMEA YHREGKRTAY YRANQKVHQH IVDVAGNPVL SDLYSSLMSK IHRARGAANA
DVLRWAESLG EHSEILEALA KRDGACLARL LREHSEHTAA EVMKVLDATS GK