| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4928 |
|---|
| Symbol | |
|---|
| ID | 6246433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 2012399 |
|---|
| End bp | 2013322 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642596665 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001861072 |
|---|
| Protein GI | 186473730 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.595965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT TTGACTGGGA CAACCTACGC ATTTTTCTAG GCGCAGCACG GTCCCAATCC
GCCCTCGAAG CGGCACACGC GCTCAAGATG AGCCAGTCCA CGATTTCGCG GCGGATCCAG
CGTCTGGAAC GGGACACCGG TTCGAAACTG TTCGAACGAA GTTCGCAGGG CTTGCGCCTG
ACGGCGGCAG GCCATCGACT ACTGGAACAT GTGGAAAGGC TAGAAACTAC CCTGCAGGCT
GTTGAAACTA GCGTCTTCAG CGACTCGGTA ACTCTAACTG GCGAGATCCG CCTTGGCGCG
ACGGAAGGGT TTGGAACGTT TTTTCTAGCG CCGCAAGTTA CACATTTCTG CGCCAGGCAT
CCTGGAATCA CGGTCGACGT GCTCCCGTTG CCACGTAACG TCAATCTGTC CAAACGGGAG
GCCGATGCAT CCGTCGCAAT CGACCGGCCA AGCGCCAACA GTTTCGTCAC GTGCAAGCTG
ACCGAGTACC GGCTTCTGCC GTACGCTACC CCGCAATATC TAAGTGAGCA TCCTCCCATC
AAAACAACCG AGGATCTCAT CGGTCACAGG TGGATTGACT ATGTCGACGA CCTGATCTTT
TCGAACCAGC AGTTTTCGCT ACCGCGCTGG CTGCCGAGCC TCAAGCCTGT CTTCCGCAGC
ACCAGTGTTA TCGCACAGGC CGAAGCGGTC CGAGCCGGAT TTGGGATCGG AGTGCTGCCA
TGTTTCCTTG GAAGTCTGGG TGGAGATCTC GTACCCGTTC TGCCCGACCA AATAGATATA
ACGCGAACTT TCTGGCTCGT TGCTCCGCCT GAGCGGCGCG AGCTTGCACG TGTGAAAGCC
CTATGGGATT ACATACGCGA CGTAGCGGAA GCCAATCACG ACTTCCTAAT GGGTAATACT
ACCGAGTCCG TCCGAATCGC ATGA
|
|---|
| Protein sequence | MNQFDWDNLR IFLGAARSQS ALEAAHALKM SQSTISRRIQ RLERDTGSKL FERSSQGLRL
TAAGHRLLEH VERLETTLQA VETSVFSDSV TLTGEIRLGA TEGFGTFFLA PQVTHFCARH
PGITVDVLPL PRNVNLSKRE ADASVAIDRP SANSFVTCKL TEYRLLPYAT PQYLSEHPPI
KTTEDLIGHR WIDYVDDLIF SNQQFSLPRW LPSLKPVFRS TSVIAQAEAV RAGFGIGVLP
CFLGSLGGDL VPVLPDQIDI TRTFWLVAPP ERRELARVKA LWDYIRDVAE ANHDFLMGNT
TESVRIA
|
|---|
| |