Gene Bphy_4871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4871 
Symbol 
ID6246383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1947295 
End bp1948815 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content52% 
IMG OID642596615 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001861022 
Protein GI186473680 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.324146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAT CTGTCGGGGC ACTTATAACA AGTTCCGCCC GAAAGTTCGG TGACAAGACG 
GCGTTGGTTA TCGGCGGAGA AAGCTGGTCG TTTCTTCAAC TGGACTGCTT TTCCTCAAAT
GTGGCGAAGA GCCTGGAGCA GCGTGGCGTT GGAAAGGGTT CTGTCGTCTC GCTGTATTCC
CCAAATTGTG CGCAATGGAT CATCGCCTAT TATGCGATCC TGAAATTGGG TGCAGTCGTC
AACCCCTTAA ATCTGATGCT TACGTCGTCT GAGGCAGCGT ATGCGGTGAG CGACTGCAAG
GCCGTCGCTG TGTTAGGTTC CTTGGAAAAA CTGGTTCCAT TGAGAGAGGC ACTTGGGATC
AACCAAGTCA GGCTGATCTC ATTCGGAACT GCAACGGGGT CGATTGAATG TTTCAACGAC
CTGCTTTCTG GAGATGGAAC AGACCATTAT CCAGTAAGCG CGATTGAACT CGATGACCTA
TGCACCATTG GCTACACGTC GGGAACGACC GGCCACCCTA AAGGTGCCAT GCTGTCGCAT
CGCGCAATCC TTCTAAACAC CGCGATGACA TCGACATACC ATGTACGTAC TGATCGCGAT
ATCGTTGTCA GCGCACTACC ATGTTCGCAC GTCTATGGCA ATATTGTCAT GAACTGTGCT
GTCGCGTGCG GGATGACTCT TGTACTGCAC GCTGTCTTTG ATGCGAAAGC GATTCTCGCG
AGTATTGAGG CCTATCGGGC GACGATATTC GAGGGCGTGC CGACGATGTA TATGTACCTG
CTGAATTTGC CCGAACTTGC CGATTACGAT GTTTCCACGT TGACGCGCTG CACGGTCGGC
GGTCAGACCA TGCCACCACA AAAGATGGAG GAGGTCGAGC GGAAATTTGG CTCCCCGTTG
CTTGAATTGT GGGGTATGAC TGAGTTGGGA GGACTAGGAG CGACACATCC CCTGTACGGT
CCGAAAAAAA ACGGGTCAAT CGGGGTTCCG CTGCCGTTAT TGAAAGCGCG GATCGCATCG
TTAGAATCAC CATCTAAAGA AGTGACGGCT CGAGAAGTAG GCGAGCTTCA GATGAAAGGC
CCCATCACCA TGATGGGGTA TTATGGTCGT CCCGAAGCGA CTCTGGAAAC CATTGATGCT
GACGGCTGGC TGCATACCGG CGACCTCGCT TATATAGACG AGGAAGGATT CATTTTTATC
GTTGACCGCC TGAAAGATAT GGTCATCACG GGTGGGTTCA ATATCTACCC GGCGGAACTG
GAGCGTGTCC TGTGTGAGCA TCCATCGATT GCCCTAGCTG CAGTCGTGGG TGTACCAGAT
GATATTAAGG GAGAACTAGC GAAGGCCTTC ATTGTACGCA AGCACGGCGC GGAGATAAGA
ACGGAAGATG TTTTTGAGTT TTGTCGTCAG AGGTTGGCTG CTTACAAGGT GCCTCGTTTG
ATCGAGTTTG TAGAGGATCT CCCGAAGACC AATTCGGGAA AGATCTTGCG GCGCGAGTTG
AGAAAGAAGG CACTGCAGTA A
 
Protein sequence
MEQSVGALIT SSARKFGDKT ALVIGGESWS FLQLDCFSSN VAKSLEQRGV GKGSVVSLYS 
PNCAQWIIAY YAILKLGAVV NPLNLMLTSS EAAYAVSDCK AVAVLGSLEK LVPLREALGI
NQVRLISFGT ATGSIECFND LLSGDGTDHY PVSAIELDDL CTIGYTSGTT GHPKGAMLSH
RAILLNTAMT STYHVRTDRD IVVSALPCSH VYGNIVMNCA VACGMTLVLH AVFDAKAILA
SIEAYRATIF EGVPTMYMYL LNLPELADYD VSTLTRCTVG GQTMPPQKME EVERKFGSPL
LELWGMTELG GLGATHPLYG PKKNGSIGVP LPLLKARIAS LESPSKEVTA REVGELQMKG
PITMMGYYGR PEATLETIDA DGWLHTGDLA YIDEEGFIFI VDRLKDMVIT GGFNIYPAEL
ERVLCEHPSI ALAAVVGVPD DIKGELAKAF IVRKHGAEIR TEDVFEFCRQ RLAAYKVPRL
IEFVEDLPKT NSGKILRREL RKKALQ