| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4806 |
|---|
| Symbol | |
|---|
| ID | 6246321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1872659 |
|---|
| End bp | 1873270 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642596553 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001860960 |
|---|
| Protein GI | 186473618 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.135415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.130992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTT CCGGTCTTCT CGTCTTCGCG CTCGCGCTGA TCGTCGCGGC GGGCTCGCCC
GGCCCCAGTA TCGCGGCCCT CGTCGCGCGC GTGCTCACCA ACGGCTTCCG GGACGTGCTG
CCGTTCCTCG CCGCGATGTG GATCGGCGAA GCGCTGTGGC TCACCTGCGC GGTCGCCGGG
CTGGCCGTCG TCGCGCACAC CTTCGCACTG GTGTTCATCG CGCTTAAATT TGCGGGCGTG
TGCTATCTGC TGTTTCTCGC GTGGAAGATG TGGCGCGCGC CCACCGATGT TCATGCAGGC
GCGTTGCCAC GCGGCCAGTC GGCGTGGCGT ATGTTCGTCG CGGGGCTGAT GGTGACGCTC
GGCAATCCCA AGATCATGGT GTTCTATCTC GCGCTGCTGC CGACGCTCGT CGACGTATCG
CGCGTCGGCA CATTCGCGTG GCTCGAACTC ACGCTGACGA TGCTCGCCGT GCTGATGACC
GTCGATTTCC TCTGGGCGCT GCTTGCCACC AAAGCGCGCA CGCTGCTGAC CAGCCGCCGC
GCGGTAAAAA TCGCAAACCG CACCAGCGCG GCGATGATGG CGGGCGCCGC GGCCGCAATC
GCGACGCGCT AG
|
|---|
| Protein sequence | MALSGLLVFA LALIVAAGSP GPSIAALVAR VLTNGFRDVL PFLAAMWIGE ALWLTCAVAG
LAVVAHTFAL VFIALKFAGV CYLLFLAWKM WRAPTDVHAG ALPRGQSAWR MFVAGLMVTL
GNPKIMVFYL ALLPTLVDVS RVGTFAWLEL TLTMLAVLMT VDFLWALLAT KARTLLTSRR
AVKIANRTSA AMMAGAAAAI ATR
|
|---|
| |