| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4652 |
|---|
| Symbol | |
|---|
| ID | 6246169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1719784 |
|---|
| End bp | 1720857 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642596401 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_001860808 |
|---|
| Protein GI | 186473466 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.246771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCGA ATAAACCATC AGCCGTTGCT GTGCATTGCA CAAACTGTGG ACGTCTCATG
CCTGAAGCTC CTACGCAGTC TTCGTCTTCC TCGGTGATCG CGCTGCGGCG CGCTGCCCAC
CTTCATCCCG TACGCAATCC GGGCGTGCCT TTCGATCTCG CGTGGCTCGA TGGGCTGCGC
GTCAACCAGT CGGCTGTCGA ACGCCGCACG TCGACGCTCG CCACGCGCCG GACCGTCAAG
AAAGACGCGC AGGCCGCATG GCTGCTGAAG GCCGTCACCT GTATCGATCT GACCACGCTC
AATGGCGACG ACACGGAAGG CCGCGTGCGG CGTCTGTGCG CGAAGGCGCG CCAACCGGTG
CGCGCCGATA TCCTCGCGGC GCTCGATGTG CCGTCGCACA GCATCACGAC AGGCGCCGTG
TGCGTGTATC ACCGCTACGT CGCCGCCGCC GTCGATGCGT TGCGCGGCAC CGGCATTCCC
GTTGCAGCTG TGTCGACGGG CTTTCCCGCC GGCCTGATTC CGCATCCGCT GAAGCTGAAG
GAAATCGAAG CGTCGGTGGC CGACGGCGCG CAGGAAATCG ACATCGTCGT CACGCGCGAA
CATGTGCTCA CGGGCAACTG GCAGGCGCTC TACGACGAAG TGCGCGACTT TCGCGCCGCA
TGCGGCGGAG CGCATCTCAA AGCGATTCTC GCGACGGGCG ATATCCAGAC GTTGTCGAAC
GTCGCGCGCG CATCGATGAT CTGCATGATG GCAGGCGCTG ATTTCATCAA GACGTCGACG
GGCAAGGAGG GCGTCAATGC GACCCTCGAC GTGTCGCTCG TGATGGCGCG CATGATTCGC
GAATACCACG CACGCACGGG CATTCTGATC GGCTTCAAGC CGGCGGGCGG CGTGTCGAAC
GCGAAGACGG CGCTGTCGTA CCAGATCCTG ATGAAAGAGG AGTTGGGCCG TCCTTGGCTC
GAACCCGAAC TGTTCCGCTT CGGCGCGTCC AGTCTTCTTG CCGACATCGA ACGCCAGCTC
GAGCATCACG CGACTGGCCG CTATTCCGCC TTCAACCGCC ACCCTGTTGC CTGA
|
|---|
| Protein sequence | MHANKPSAVA VHCTNCGRLM PEAPTQSSSS SVIALRRAAH LHPVRNPGVP FDLAWLDGLR
VNQSAVERRT STLATRRTVK KDAQAAWLLK AVTCIDLTTL NGDDTEGRVR RLCAKARQPV
RADILAALDV PSHSITTGAV CVYHRYVAAA VDALRGTGIP VAAVSTGFPA GLIPHPLKLK
EIEASVADGA QEIDIVVTRE HVLTGNWQAL YDEVRDFRAA CGGAHLKAIL ATGDIQTLSN
VARASMICMM AGADFIKTST GKEGVNATLD VSLVMARMIR EYHARTGILI GFKPAGGVSN
AKTALSYQIL MKEELGRPWL EPELFRFGAS SLLADIERQL EHHATGRYSA FNRHPVA
|
|---|
| |