Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4554 |
Symbol | |
ID | 6246073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1614889 |
End bp | 1615719 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642596305 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_001860712 |
Protein GI | 186473370 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | [TIGR01762] chlorinating enzymes |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.762546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGC ACTTGAGCGA GGCGCAGGTC GCGCACTTCA AACAGCACGG GTATGTCTAC CCGATGCGCG CGATCGGCGC GGAAGAGGCG GCGGAGTATC GTCGCATCAT CGAGCGCTAC GAGGCGTCTT CCGGCGAAGA TGTCAACAAG ACCCTGAAAA TCAAGGGTCA TCTGGCGCTG CCCGCCATCG TCGAACTCGC GCGTCACCCC GCCATTCTCG ATGCTGTCGA AGACGTGATC GGGCCGGACA TCATGCTGTT TGGCGCATCC ATCTTCGCGA AGAACGGACG CGATCCGCGT TATGTGTCGT GGCATCAGGA CTCGACGTAT TTCGGGCTTA CGCCACATGA GGAAGTGACG GTGTGGGTCG CGCTCACACC CGCGAACTCG CTGAACGGCG TGCTGCGCGT CTTGCCCGGT TCGCACAGTG GGCCTGACTT AAGGCACGTC GAAACCTACG CGAAGGACAA CATGCTCGCG AAAGGGCAGA CGCTTGTCGG CATCGACGAG AACCTCGCTG TCGAAATGCC GCTGCAGCCC GGCGAGTTTT CGATGCATCA CGAACGCACC GCACACAGTT CGCTGCCGAA TCGCTCGGAC GACAGGCGTA TCGGCTTCGC ATTCTTCTAC GTGCCGGCGC ATGTCCGCTC GGCCTCGGGT CGGCGTCGCG CGACGCTCGT GCGCGGCGTC GACCGCTTCC ATCACTGGGA CCCCGACACG CTGCCCGAAT ACGATTGCGA TCCGCGTTCG ATGAGCGAAC TCGTACAAAC GTGGGGCAAA TATAAGGACG GTGAAGTGAA GCAGGCAGCG GACATGACCG CGCCGCAGTG A
|
Protein sequence | MTKHLSEAQV AHFKQHGYVY PMRAIGAEEA AEYRRIIERY EASSGEDVNK TLKIKGHLAL PAIVELARHP AILDAVEDVI GPDIMLFGAS IFAKNGRDPR YVSWHQDSTY FGLTPHEEVT VWVALTPANS LNGVLRVLPG SHSGPDLRHV ETYAKDNMLA KGQTLVGIDE NLAVEMPLQP GEFSMHHERT AHSSLPNRSD DRRIGFAFFY VPAHVRSASG RRRATLVRGV DRFHHWDPDT LPEYDCDPRS MSELVQTWGK YKDGEVKQAA DMTAPQ
|
| |