Gene Bphy_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4554 
Symbol 
ID6246073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1614889 
End bp1615719 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID642596305 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_001860712 
Protein GI186473370 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID[TIGR01762] chlorinating enzymes 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.762546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC ACTTGAGCGA GGCGCAGGTC GCGCACTTCA AACAGCACGG GTATGTCTAC 
CCGATGCGCG CGATCGGCGC GGAAGAGGCG GCGGAGTATC GTCGCATCAT CGAGCGCTAC
GAGGCGTCTT CCGGCGAAGA TGTCAACAAG ACCCTGAAAA TCAAGGGTCA TCTGGCGCTG
CCCGCCATCG TCGAACTCGC GCGTCACCCC GCCATTCTCG ATGCTGTCGA AGACGTGATC
GGGCCGGACA TCATGCTGTT TGGCGCATCC ATCTTCGCGA AGAACGGACG CGATCCGCGT
TATGTGTCGT GGCATCAGGA CTCGACGTAT TTCGGGCTTA CGCCACATGA GGAAGTGACG
GTGTGGGTCG CGCTCACACC CGCGAACTCG CTGAACGGCG TGCTGCGCGT CTTGCCCGGT
TCGCACAGTG GGCCTGACTT AAGGCACGTC GAAACCTACG CGAAGGACAA CATGCTCGCG
AAAGGGCAGA CGCTTGTCGG CATCGACGAG AACCTCGCTG TCGAAATGCC GCTGCAGCCC
GGCGAGTTTT CGATGCATCA CGAACGCACC GCACACAGTT CGCTGCCGAA TCGCTCGGAC
GACAGGCGTA TCGGCTTCGC ATTCTTCTAC GTGCCGGCGC ATGTCCGCTC GGCCTCGGGT
CGGCGTCGCG CGACGCTCGT GCGCGGCGTC GACCGCTTCC ATCACTGGGA CCCCGACACG
CTGCCCGAAT ACGATTGCGA TCCGCGTTCG ATGAGCGAAC TCGTACAAAC GTGGGGCAAA
TATAAGGACG GTGAAGTGAA GCAGGCAGCG GACATGACCG CGCCGCAGTG A
 
Protein sequence
MTKHLSEAQV AHFKQHGYVY PMRAIGAEEA AEYRRIIERY EASSGEDVNK TLKIKGHLAL 
PAIVELARHP AILDAVEDVI GPDIMLFGAS IFAKNGRDPR YVSWHQDSTY FGLTPHEEVT
VWVALTPANS LNGVLRVLPG SHSGPDLRHV ETYAKDNMLA KGQTLVGIDE NLAVEMPLQP
GEFSMHHERT AHSSLPNRSD DRRIGFAFFY VPAHVRSASG RRRATLVRGV DRFHHWDPDT
LPEYDCDPRS MSELVQTWGK YKDGEVKQAA DMTAPQ