Gene Bphy_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4480 
Symbol 
ID6246001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1521974 
End bp1523557 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content63% 
IMG OID642596233 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001860640 
Protein GI186473298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.36342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA ACAACAAGGT GCACTTCTCG CACAACGATG CGCGCGCCGT GGTGATCATC 
GGCTCGGGCG CGGGCGGCGG CACACTCGCG AACGAGCTGG CGCAAAAGGG CATCGACGTG
ATCGTGCTCG AGGCGGGCAA ACTGCATACG CAAGGCGATT TCACTACCGA CGAGTGGGGT
TCGTTCTCGA TGCTCTCCTG GCTCGACAGG CGAACGACAT CGGGCACGTG GCGCATCGCC
ACCGACTTCC CGAATCTGCC GGCATGGATC TGCAAGACCG TCGGCGGCAC GACAACGCAT
TGGGCGGGCG CGAGCCTGCG TTTCCAGCCC CATGAATTCA AGGCGAAAAC GCATTACGGC
GAGATCAAGG ATGCGAACCT GCTCGACTGG CCCGTCACAA GCGAGGAAAT GGCGCCGTGG
TACGACCGCG CCGAAAAGAA GATGGGCGTT ACGCGCACCA ACGGTTTGCC TGGTCTGCCC
GGCAACAACA ACTTCAAGGT GATGTACAAC GGCGCGACGA AGGTCGGCTA CAAGGCGTGC
AACACGGGCC ACATGGCGAC CAACAGTATC GTGCGTGATG ACCGCGCGCA TTGCTTCCAG
CGCGGCTTCT GCTTCCAGGG CTGCCGCACG GGCGCCAAAT GGTCGACGCT TTATACCGAG
ATTCCGCGCG CGCAGGCGAC GGGCCATATG GAGCTTCGCA CGCAGGCGCA GGTCGTGAAG
ATCGACACGG ACGCGAAGGG CAAGGCGAGC GCCGTGGTCT ATTACGATGC CGACGGCAAG
CTGCAACGCC AGAAAGCGCG CATCGTGGCG GTGGCGGGCA ACGCGATCGA AACGCCGCGC
CTGCTGCTGA ATTCGCATTC GAGCCGCTTC CCGGACGGAC TCGCCAATTC GTCGGGACAG
GTGGGCCGCA ACTACATGCG TCATACCACG GGTTCCGTCT ACGCCGTGTT CAACGACAAG
GTCGACATGT ACAAGGGCAC GACGATGGCG GGCATCATCG AAGACGAAGC GCGCTTCGAT
ACGTCGCGTG GTTTCGCGGG TGGCTATCAC ATGGAAACGG TGTCGCTCGG TCTGCCGTTC
TATGCGGCGT TTCTGAATCC CGGCGCGTGG GGCGCCGACT TCGCGCAGGC AATGGATTCG
TATCCGTACA CGGCAGGCAT GTGGATCGTC GGCGAGGACA TGCCGCGCGA GACGAACCGC
ATCACGCTGA ATACAGACGT GAAGGATCAG TACGGCTTGC CCGTGCCCAA CGTGCATTTC
GACGATCACC CGAACGACGA AGCAATGCGC GAGCACGGCT TCAGGCAGGG CAGCGCGGTG
TATCAGGCGG CAGGTGCGAA GACCGTGTAT CGCGTGCCGC CTTATCCGTC GACGCACAAT
CTCGGCACTG CGCGCATGAG CGCGCGGGCG CAGGACGGCG TGTGCAACAG GTTCGGCCAG
ACGCATGACG CGCCGAATCT GTTCATCTCC GACGGCAGCC AGTTCACGAC GGGCGCCGCC
GAAAACCCGA CACTGACTAT CGTGACGCTC GCGATCCGTC AGGCCGACTA CATCGCGAGT
CAGATGAACA GGCGCACAAT CTGA
 
Protein sequence
MDDNNKVHFS HNDARAVVII GSGAGGGTLA NELAQKGIDV IVLEAGKLHT QGDFTTDEWG 
SFSMLSWLDR RTTSGTWRIA TDFPNLPAWI CKTVGGTTTH WAGASLRFQP HEFKAKTHYG
EIKDANLLDW PVTSEEMAPW YDRAEKKMGV TRTNGLPGLP GNNNFKVMYN GATKVGYKAC
NTGHMATNSI VRDDRAHCFQ RGFCFQGCRT GAKWSTLYTE IPRAQATGHM ELRTQAQVVK
IDTDAKGKAS AVVYYDADGK LQRQKARIVA VAGNAIETPR LLLNSHSSRF PDGLANSSGQ
VGRNYMRHTT GSVYAVFNDK VDMYKGTTMA GIIEDEARFD TSRGFAGGYH METVSLGLPF
YAAFLNPGAW GADFAQAMDS YPYTAGMWIV GEDMPRETNR ITLNTDVKDQ YGLPVPNVHF
DDHPNDEAMR EHGFRQGSAV YQAAGAKTVY RVPPYPSTHN LGTARMSARA QDGVCNRFGQ
THDAPNLFIS DGSQFTTGAA ENPTLTIVTL AIRQADYIAS QMNRRTI