Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4480 |
Symbol | |
ID | 6246001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1521974 |
End bp | 1523557 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642596233 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001860640 |
Protein GI | 186473298 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.36342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA ACAACAAGGT GCACTTCTCG CACAACGATG CGCGCGCCGT GGTGATCATC GGCTCGGGCG CGGGCGGCGG CACACTCGCG AACGAGCTGG CGCAAAAGGG CATCGACGTG ATCGTGCTCG AGGCGGGCAA ACTGCATACG CAAGGCGATT TCACTACCGA CGAGTGGGGT TCGTTCTCGA TGCTCTCCTG GCTCGACAGG CGAACGACAT CGGGCACGTG GCGCATCGCC ACCGACTTCC CGAATCTGCC GGCATGGATC TGCAAGACCG TCGGCGGCAC GACAACGCAT TGGGCGGGCG CGAGCCTGCG TTTCCAGCCC CATGAATTCA AGGCGAAAAC GCATTACGGC GAGATCAAGG ATGCGAACCT GCTCGACTGG CCCGTCACAA GCGAGGAAAT GGCGCCGTGG TACGACCGCG CCGAAAAGAA GATGGGCGTT ACGCGCACCA ACGGTTTGCC TGGTCTGCCC GGCAACAACA ACTTCAAGGT GATGTACAAC GGCGCGACGA AGGTCGGCTA CAAGGCGTGC AACACGGGCC ACATGGCGAC CAACAGTATC GTGCGTGATG ACCGCGCGCA TTGCTTCCAG CGCGGCTTCT GCTTCCAGGG CTGCCGCACG GGCGCCAAAT GGTCGACGCT TTATACCGAG ATTCCGCGCG CGCAGGCGAC GGGCCATATG GAGCTTCGCA CGCAGGCGCA GGTCGTGAAG ATCGACACGG ACGCGAAGGG CAAGGCGAGC GCCGTGGTCT ATTACGATGC CGACGGCAAG CTGCAACGCC AGAAAGCGCG CATCGTGGCG GTGGCGGGCA ACGCGATCGA AACGCCGCGC CTGCTGCTGA ATTCGCATTC GAGCCGCTTC CCGGACGGAC TCGCCAATTC GTCGGGACAG GTGGGCCGCA ACTACATGCG TCATACCACG GGTTCCGTCT ACGCCGTGTT CAACGACAAG GTCGACATGT ACAAGGGCAC GACGATGGCG GGCATCATCG AAGACGAAGC GCGCTTCGAT ACGTCGCGTG GTTTCGCGGG TGGCTATCAC ATGGAAACGG TGTCGCTCGG TCTGCCGTTC TATGCGGCGT TTCTGAATCC CGGCGCGTGG GGCGCCGACT TCGCGCAGGC AATGGATTCG TATCCGTACA CGGCAGGCAT GTGGATCGTC GGCGAGGACA TGCCGCGCGA GACGAACCGC ATCACGCTGA ATACAGACGT GAAGGATCAG TACGGCTTGC CCGTGCCCAA CGTGCATTTC GACGATCACC CGAACGACGA AGCAATGCGC GAGCACGGCT TCAGGCAGGG CAGCGCGGTG TATCAGGCGG CAGGTGCGAA GACCGTGTAT CGCGTGCCGC CTTATCCGTC GACGCACAAT CTCGGCACTG CGCGCATGAG CGCGCGGGCG CAGGACGGCG TGTGCAACAG GTTCGGCCAG ACGCATGACG CGCCGAATCT GTTCATCTCC GACGGCAGCC AGTTCACGAC GGGCGCCGCC GAAAACCCGA CACTGACTAT CGTGACGCTC GCGATCCGTC AGGCCGACTA CATCGCGAGT CAGATGAACA GGCGCACAAT CTGA
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Protein sequence | MDDNNKVHFS HNDARAVVII GSGAGGGTLA NELAQKGIDV IVLEAGKLHT QGDFTTDEWG SFSMLSWLDR RTTSGTWRIA TDFPNLPAWI CKTVGGTTTH WAGASLRFQP HEFKAKTHYG EIKDANLLDW PVTSEEMAPW YDRAEKKMGV TRTNGLPGLP GNNNFKVMYN GATKVGYKAC NTGHMATNSI VRDDRAHCFQ RGFCFQGCRT GAKWSTLYTE IPRAQATGHM ELRTQAQVVK IDTDAKGKAS AVVYYDADGK LQRQKARIVA VAGNAIETPR LLLNSHSSRF PDGLANSSGQ VGRNYMRHTT GSVYAVFNDK VDMYKGTTMA GIIEDEARFD TSRGFAGGYH METVSLGLPF YAAFLNPGAW GADFAQAMDS YPYTAGMWIV GEDMPRETNR ITLNTDVKDQ YGLPVPNVHF DDHPNDEAMR EHGFRQGSAV YQAAGAKTVY RVPPYPSTHN LGTARMSARA QDGVCNRFGQ THDAPNLFIS DGSQFTTGAA ENPTLTIVTL AIRQADYIAS QMNRRTI
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