| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4392 |
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| Symbol | |
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| ID | 6245914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1427751 |
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| End bp | 1431209 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642596146 |
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| Product | trehalose synthase |
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| Protein accession | YP_001860553 |
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| Protein GI | 186473211 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.21351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG ACGATCCCGC AGAAAGCACG TCGCAGGCCC ATATCACCGA CACGACGACG
GCAGCCGCGC CATCGAAGCC GCGTACGGCA CGGCGCGGCA AAGTGTCGAC CCTATCGGAC
GATCCGCTCT GGTACAAGGA CGCGATCATT TACCAGGTGC ACATCAAGTC GTTCTTCGAT
GCGAACAACG ACGGCGTCGG CGATTTCCCC GGCCTGATCG CAAAGCTCGA CTACATCGCG
GAACTCGGCG TGAGCGCGAT CTGGCTGTTG CCGTTCTATC CGTCGCCGCG CCGCGACGAC
GGATACGATA TCGCCGACTA TCGCAACGTG CACCCCGACT ACGGTACGAT CGGCGACGTC
AAGCGCTTCA TTCAGGAAGC CCACGCGCGC GGGCTGCGCG TGATTACCGA GCTCGTCATC
AACCACACGT CGGACCAGCA TCCTTGGTTC CAGCGCGCAC GCCGCGCGAA GCCCGGCTCG
AATCATCGCA ACTACTACGT ATGGTCGGAC ACGGACAAGA AGTACGAGAA GACGCGCATT
ATCTTCATCG ACACGGAACC GTCGAACTGG ACGCACGATC CCGTCGCGGG CCAGTACTAC
TGGCACCGTT TCTACTCGCA CCAGCCCGAC CTGAACTTCG ACAACCCCGC CGTGATGCGC
GAAGTGCTGC AAGTGATGCG CTTCTGGCTC GATATGGGCA TCGACGGTCT GCGGCTCGAT
GCCGTGCCCT ATCTCGTGGA ACGCGAAGGC ACGAACAACG AGAACCTTCC CGAAACGCAC
GCAATCTTGA AGAAGATTCG CGCGACCATC GACGCAGAGT ATCCGAACCG GATGCTGCTG
GCCGAAGCGA ATCAGTGGCC GGAAGACGTG CAGGAATACT TCGGCAATGA AGACGAATGC
CACATGGCGT TCCACTTCCC GCTGATGCCG CGCATCTACA TGTCGATCGC GAGCGAGGAC
CGCTTCCCGA TCACCGACAT CATGAAGCAG ACGCCGGATC TCGCGGAAAC GAACCAGTGG
GCGATCTTCC TGCGCAATCA CGATGAACTC ACGCTCGAAA TGGTCACGGA CTCCGAGCGC
GACTACTTGT GGAACACGTA TGCGAGCGAC CGCCGGGCAC GCCTGAACCT GGGCATCCGC
CGACGCCTCG CGCCGCTGAT GGAGCGCGAC CGCCGCCGCA TCGAACTGAT CAATTCGCTG
CTCCTGTCGA TGCCCGGCAC GCCTGTCATC TATTACGGCG ACGAGCTCGG CATGGGCGAC
AACATTCACC TCGGCGACCG GGACGGCGTG CGCACGCCGA TGCAGTGGTC GTCGGACAGA
AACGGTGGCT TCTCGCGCGC CGACCCCGAG CAGCTCGTGC TGCCGCCCGT GATGGGCGCG
CTGTACGGCT TCGACGCCGT CAATGTTGAA GCGCAAAACC GCGACCCGCA TTCGCTGCTC
AACTGGACGC GCCGCATGCT AGCGACACGC CGCTCGAAGC ACACGTTCGG GCGCGGCACG
ATCCGCTTTC TGAAGCCGAG CAACCGCAAG ATACTCGCGT ATCTGCGCGA GCTGCCCGGC
GAGCCGCCCA TTCTGTGCGT CGCAAACCTG TCGCGCGCAC CGCAGGCGGT CGAACTCGAT
CTGTCGGAAT TCAACGGGGC GACGCCGATA GAAATGACGG CCGATTCCGT TTTTCCGCGC
ATCGGCCAGC TGACGTATCT GCTGACGTTT CCCCCATACG GCTTCCTGTG GTTCCTTCTT
TGCGAAGGCC AGGACCGCCC CACATGGAGC CAGCCGCCGT CCGAGCCGCT CCCCGATTTC
GTCACCATCG TGATTCGCGA AGGCCAGACG GGCCCGACGC CGGAAAACGT GAGGCTGCTC
GAATCCGAAG TGCTGCCATC GTGGCTGGGA CGCCGCCGCT GGTTTGCATC GAAGGATCAG
AAGATGCACG CGGTGCGGCT CGCCGCGCTC ACGACGATTC CGGAAGCGGG CTTCGCTTTC
ACGGAAATCG AAGCGGATGT CGGCGACCAC ACGGAACGTT ATGTGCTGCC CATCGCGATT
ACGTGGGGCG CCGATACGAC CAACCCGCTT TTCATGCAAC TCGCGCTCGC ACGCGTGCGC
CGCGGCCGCA ACGTGGGCCA TCTGACGGAC GCGTTTGCGC TGCCGCTGTT CGCTTATGGC
ACATTGCGCA AATTGCGCGA ACGCGCCGCC GTGCCGACCG TGCAGAAGAG CACGATCCAC
TTCATTCCGA CGGACCGTTT CGCCGAACTC GAACTGGGCG ATCAGCCGGA AATCCGCTGG
CTCGCTGCCG AGCAAAGTAA CAGCTCGCTC GTGATCGCCG ACAAGGTGGT GCTGAAGCTC
GTGCGGCGTC TGCTGAAGGG CGTGCATCCA GAAGCGGAAA TGACCCGCTA TCTGACGCAG
CTCGGCTACG CGAACACGGC GCCGCTGATC GGCGAAGTGG TGCGCGTCGA TCCCGAGAAC
GTGCCGCATA CGCTGTGCAT CCTGCAAGGC TTCGTCGACA ACCAGGGCGA TGCATGGAAC
TGGGCGCTCG ACACATTGCG CCGTTCGATC GACGAACTCG CGCTCGTGAT GGACGGCAGC
GATGCGAACC AGGCGAATCA GGATCGCGTG AACGAAGAAG AGGCGATTGA AGGCTACGCG
TCGTACATGG GCATCATCGG CAAGCGGCTC GGCGAGCTGC ATGTGGCGCT CGCGGCGCCC
TCGGACGATC CCGCGTTCGA TCCCGAACCC GCCGGTGCGC AGCAGGTGCA GGCGTGGATC
GACGGCACGC AGAAGCTGCT GGCCGTCGCG CTTGAACAGC TCGAAAAGAA CGTCGGTCAG
CTCGGCGAGG ATGCCGCGCT GCTGGGGCGC AGCATCCTCG ATCGCAAGGA CAAGCTCGTC
GAAGCAGTGT CGAAGCTGGT GACGCCCGAT GCACATGCAC TGCGTACGCG CATTCACGGC
GACTTTCATC TGGGCCAGGT GCTGGTGTCG CAAGGCGACG CGTTCCTGAT CGACTTCGAA
GGCGAGCCCG CGCGCGAACT CGACGAACGG CGAGCGAAAT CGAGCCCGTT GCGCGACGTC
GCGGGTCTGC TGCGTTCGCT GTCGTATGCG AGCGCCGCTG CACAATCGAC AATGGAAGCC
GCGCCGCAAA TGACGGCCGA CCGCAAGCGC GTGCTCTTCG AGCGCTTCCG TGTTGCGGCC
GCCGAGGCCT TCCTTGATCG GTACCGCGAG GCGACACAGG CGGCAGCACA GCCGCTCGTC
GCGGCCGAGC ACGAACAGGC GCTGCTCAAT CTGTTCCTGA TCGAAAAGGC CGCCTATGAA
ATCCGCTATG AGGCGGCCAA CCGGCCGACG TGGCTCAGCT TGCCGGTGCG CGGACTCGCC
GCACTGACGA GCAGCCTGCT CGGTGACACG GGCGCGGGGC CGCATTCTCC GTCGGCTGCC
GCGACACCGC CAGAAGGATC AGAGGGTGAC TATGAGTGA
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| Protein sequence | MKRDDPAEST SQAHITDTTT AAAPSKPRTA RRGKVSTLSD DPLWYKDAII YQVHIKSFFD
ANNDGVGDFP GLIAKLDYIA ELGVSAIWLL PFYPSPRRDD GYDIADYRNV HPDYGTIGDV
KRFIQEAHAR GLRVITELVI NHTSDQHPWF QRARRAKPGS NHRNYYVWSD TDKKYEKTRI
IFIDTEPSNW THDPVAGQYY WHRFYSHQPD LNFDNPAVMR EVLQVMRFWL DMGIDGLRLD
AVPYLVEREG TNNENLPETH AILKKIRATI DAEYPNRMLL AEANQWPEDV QEYFGNEDEC
HMAFHFPLMP RIYMSIASED RFPITDIMKQ TPDLAETNQW AIFLRNHDEL TLEMVTDSER
DYLWNTYASD RRARLNLGIR RRLAPLMERD RRRIELINSL LLSMPGTPVI YYGDELGMGD
NIHLGDRDGV RTPMQWSSDR NGGFSRADPE QLVLPPVMGA LYGFDAVNVE AQNRDPHSLL
NWTRRMLATR RSKHTFGRGT IRFLKPSNRK ILAYLRELPG EPPILCVANL SRAPQAVELD
LSEFNGATPI EMTADSVFPR IGQLTYLLTF PPYGFLWFLL CEGQDRPTWS QPPSEPLPDF
VTIVIREGQT GPTPENVRLL ESEVLPSWLG RRRWFASKDQ KMHAVRLAAL TTIPEAGFAF
TEIEADVGDH TERYVLPIAI TWGADTTNPL FMQLALARVR RGRNVGHLTD AFALPLFAYG
TLRKLRERAA VPTVQKSTIH FIPTDRFAEL ELGDQPEIRW LAAEQSNSSL VIADKVVLKL
VRRLLKGVHP EAEMTRYLTQ LGYANTAPLI GEVVRVDPEN VPHTLCILQG FVDNQGDAWN
WALDTLRRSI DELALVMDGS DANQANQDRV NEEEAIEGYA SYMGIIGKRL GELHVALAAP
SDDPAFDPEP AGAQQVQAWI DGTQKLLAVA LEQLEKNVGQ LGEDAALLGR SILDRKDKLV
EAVSKLVTPD AHALRTRIHG DFHLGQVLVS QGDAFLIDFE GEPARELDER RAKSSPLRDV
AGLLRSLSYA SAAAQSTMEA APQMTADRKR VLFERFRVAA AEAFLDRYRE ATQAAAQPLV
AAEHEQALLN LFLIEKAAYE IRYEAANRPT WLSLPVRGLA ALTSSLLGDT GAGPHSPSAA
ATPPEGSEGD YE
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