| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4391 |
|---|
| Symbol | |
|---|
| ID | 6245913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1425533 |
|---|
| End bp | 1427758 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642596145 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001860552 |
|---|
| Protein GI | 186473210 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.470909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC AACACAACGT TCAACTAGAT GCGGCCGGTC TGAATCGCGT GGACCTGGAT
GCGCTCGTCG ATGCGCGCCA TCACGATCCG TTTTCGCAAC TGGGCATGCA CCAGACAAGC
GCCGGTCCCG TCGTCCGCGT GATGCTGCCG AACGCAGCGC ACGTCGCGGT GATTGCGCGC
GACGACGGCC GGCTGCTCGG CGAACTGGAA CAGCTGCATC CGGGCGGCCT GTTCGCGGGC
CCGGTTAGCG AAGCCGTGCC GTATCGCTTG CGGATCGACT GGCATGGCTC GGTGCAGGAG
ATCGAAGACA CCTATTCATT CGGCTCCGTG CTCGGCGACG AGCCGTTGCA GCGCGTCGCG
TGGGGCGATC CCTATGCGGT GCTCGAATGC CTCGGGTCGC GGCCCCACAC GATGGACGGC
GTGCCTGGCG TGCGCTTCGC GGTGTGGGCG CCGAATGCGC GGCGCGTGTC GGTCGTGGGC
GACTTCAACT CGTGGGACGG CCGCCGGCAT CCGATGCGTC TGCGCCACCA GGCAGGCGTG
TGGGAACTGT TTGTGCCGCG CATCGGCGCG GGCACGCGCT ACAAGTACGA GATGCTGGCG
CGCGACGGGC ATCCACTGCC GCTCAAGGCC GACCCTTGCG CGATGCAGAC GGAGAAGCCG
CCCGCGACGG CATCCATCGT CGCGCATGTC GACGAGGTCG AGCATTTCCC GTGGACGGAC
GGCGACTGGA TGCAGACGCG TGGGGGCAAG CAGACGGCGC AATCGGCGAT TTCGATTTAC
GAGGTGCACG CGGAATCGTG GCTGCGCATC GCGGAGGAAG GGCATCGCGG CCTGAACTGG
TCGGAGCTGG CGGATCGCCT GATTCCGTAC GCGAAGGAAA TGGGCTTCAC GCATATCGAG
TTCATGCCCG TGGCCGAGCA TCCCTTCGGC GGCTCGTGGG GTTATCAGCC GCTGTCGCAG
TTCGCGCCGT CGGCACGCTT CGGCACGCCG GAGCAGTTCG CGGGCTTCGT GAACCGCGCG
CACGAAGCGG GACTCGGCGT GATTCTCGAC TGGGTGCCTG CGCACTTTCC GAACGATTCA
CATGGGCTGG TGGAGTTCGA CGGCACGCCG CTTTACGAGC ATGCCGATCC GCGCGAGGGC
TATCACCAGG ACTGGAACAC GATGATTTAC AACCTCGGCC GCAACGAGGT GAGCGCGTTC
CTCATCGCGT CGGCGCTGGC GTGGCTGAAG CGCTATCACG TCGACGGCCT GCGCGTCGAT
GCTGTCGCGT CGATGCTCTA CCGCGACTAT TCACGCGCGG CGGGCGAGTG GGTGCCGAAT
ATTTATGGCG GCCGTGAGAA TCTCGAGTCG ATTGCGTTTC TGAAGCGCCT GAATCATGAA
GTGCAGCATA TGCCAGACGT GCACGGCGCA ATCACGATCG CGGAGGAATC GACGGCATGG
CCGGGCGTGA CGGCGCGCGT CGACGATGGC GGACTGGGCT TTCAGTTCAA GTGGAACATG
GGCTGGATGC ACGACACGCT GCACTACATG CATGAAGACC CGATCTATCG GCAATGGCAT
CACCACAACA TGACGTTTGC GATGGTGTAC GCGTATTCGG AGAAGTTCGT GCTGCCTTTG
TCACACGATG AAGTCGTGCA CGGCAAAGGC TCGCTGCTGG GCAAGATGCC GGGCGACCGC
TGGCAAAAGT TTGCGAATCT GCGAGCGTAC TTCGGGTTCA TGTGGACGCA TCCGGGCAAG
AAGCTGATGT TCATGGGCGG CGAGTTCGGG CAGATGGCGG AGTTCGATCA CGACGGATCG
CCGCACTGGC ATCTGCTCGA CGACGAGTTG CACCACGGGG TGCAACGTCT GGTGCGCGAT
CTGAACCGGT TGTATCGTGA GGAACCGGCG CTGCATCGTC TCGATACTGA GCCGGGCGGG
TTCGAGTGGA TCATCGGCGA TGACACCGCT AATTCTGTTT TCGCCTGGCG TCGCGTGGAT
GGCGCGGGGC GTGAACTCAT TACGGTGTGC AACTTCACGC CCGTGCCGCG GCATGGCTAT
CGGGTCGGGA TGCCTCGTCC GGGGCGTTGG GTCGAAGTCG TGAATACAGA TGCCGCGGTT
TACGGCGGGT CTAACGTTGG CAACGGCGGT GTGATCTATA CGGATGAGGT GGCGGCGCAT
GGGCGGCCGC AGTCCGCTGC TCTGGTGTTG CCACCATTGG GGACGATTGT GCTCAGGGCC
GATTGA
|
|---|
| Protein sequence | MSEQHNVQLD AAGLNRVDLD ALVDARHHDP FSQLGMHQTS AGPVVRVMLP NAAHVAVIAR
DDGRLLGELE QLHPGGLFAG PVSEAVPYRL RIDWHGSVQE IEDTYSFGSV LGDEPLQRVA
WGDPYAVLEC LGSRPHTMDG VPGVRFAVWA PNARRVSVVG DFNSWDGRRH PMRLRHQAGV
WELFVPRIGA GTRYKYEMLA RDGHPLPLKA DPCAMQTEKP PATASIVAHV DEVEHFPWTD
GDWMQTRGGK QTAQSAISIY EVHAESWLRI AEEGHRGLNW SELADRLIPY AKEMGFTHIE
FMPVAEHPFG GSWGYQPLSQ FAPSARFGTP EQFAGFVNRA HEAGLGVILD WVPAHFPNDS
HGLVEFDGTP LYEHADPREG YHQDWNTMIY NLGRNEVSAF LIASALAWLK RYHVDGLRVD
AVASMLYRDY SRAAGEWVPN IYGGRENLES IAFLKRLNHE VQHMPDVHGA ITIAEESTAW
PGVTARVDDG GLGFQFKWNM GWMHDTLHYM HEDPIYRQWH HHNMTFAMVY AYSEKFVLPL
SHDEVVHGKG SLLGKMPGDR WQKFANLRAY FGFMWTHPGK KLMFMGGEFG QMAEFDHDGS
PHWHLLDDEL HHGVQRLVRD LNRLYREEPA LHRLDTEPGG FEWIIGDDTA NSVFAWRRVD
GAGRELITVC NFTPVPRHGY RVGMPRPGRW VEVVNTDAAV YGGSNVGNGG VIYTDEVAAH
GRPQSAALVL PPLGTIVLRA D
|
|---|
| |