Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4372 |
Symbol | truA |
ID | 6245894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1400974 |
End bp | 1401777 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642596126 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001860533 |
Protein GI | 186473191 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGA TCGCGCTTGG CATCCAGTAC GACGGCGCAG CGTTTTGCGG CTGGCAGTCG CAGCCGCACG GCAAGACGGT GCAGGACGAA CTCGAGCGGG CGCTGCGCGA GTTCGCGCTG ACGCCACTGC AAACGGTCGT CGCGGGGCGC ACGGATACGG GCGTCCACGG TCTCGGGCAA GTCGTGCATT TCGATACGGA ACTGGATCGC GCCGAATTTT CGTGGGTGCG CGGCACCAAC GCGTTTTTGC CGTCGACGGT CGCGGTGCAA TGGGCCAAGC CAATGCCGGA TGCATTTCAC GCGCGCTTTT CGGCCTTCGA GCGCACGTAT TACTACGCGC TGTACGTGCA TCCCGTGCGC TCGCCGATGC TCGCGTCCCG CGCCGGCTGG ATTCACACGC CGCTCGATGT CGATGCGATG CGTGAGGCGG CTGCCTGTCT GATCGGCGAG CACGATTTTT CGGCGTTCCG ATCGTCGGAA TGCCAGTCCA AAACGCCCGT CAAGCATCTG TATCAGATCG ACATCCGGCC GCAGGGCGAT TTCATCCACT TCCGCTTCCG GGCCAACGCG TTCCTGCACC ATATGGTCCG CAACCTGATG GGCTGTCTCG TGGCCGTAGG CCGGGGTCGA TATCCGGCCG CCTGGCTCTC GGAAGTCCTG CACGGCCGCG ACCGCAATCG CGCGGCGCCT ACCTTCATGC CCGACGGGCT GTATCTCGCT CAAGTGGGCT ATCCTGAGAC GTTTGCCGTG CCCGCGCCGC AGGCGGGCAG CGTTCCCTGG AGCACCGTTT GGACAGACTC ATGA
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Protein sequence | MTRIALGIQY DGAAFCGWQS QPHGKTVQDE LERALREFAL TPLQTVVAGR TDTGVHGLGQ VVHFDTELDR AEFSWVRGTN AFLPSTVAVQ WAKPMPDAFH ARFSAFERTY YYALYVHPVR SPMLASRAGW IHTPLDVDAM REAAACLIGE HDFSAFRSSE CQSKTPVKHL YQIDIRPQGD FIHFRFRANA FLHHMVRNLM GCLVAVGRGR YPAAWLSEVL HGRDRNRAAP TFMPDGLYLA QVGYPETFAV PAPQAGSVPW STVWTDS
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