Gene Bphy_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4372 
SymboltruA 
ID6245894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1400974 
End bp1401777 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID642596126 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_001860533 
Protein GI186473191 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGA TCGCGCTTGG CATCCAGTAC GACGGCGCAG CGTTTTGCGG CTGGCAGTCG 
CAGCCGCACG GCAAGACGGT GCAGGACGAA CTCGAGCGGG CGCTGCGCGA GTTCGCGCTG
ACGCCACTGC AAACGGTCGT CGCGGGGCGC ACGGATACGG GCGTCCACGG TCTCGGGCAA
GTCGTGCATT TCGATACGGA ACTGGATCGC GCCGAATTTT CGTGGGTGCG CGGCACCAAC
GCGTTTTTGC CGTCGACGGT CGCGGTGCAA TGGGCCAAGC CAATGCCGGA TGCATTTCAC
GCGCGCTTTT CGGCCTTCGA GCGCACGTAT TACTACGCGC TGTACGTGCA TCCCGTGCGC
TCGCCGATGC TCGCGTCCCG CGCCGGCTGG ATTCACACGC CGCTCGATGT CGATGCGATG
CGTGAGGCGG CTGCCTGTCT GATCGGCGAG CACGATTTTT CGGCGTTCCG ATCGTCGGAA
TGCCAGTCCA AAACGCCCGT CAAGCATCTG TATCAGATCG ACATCCGGCC GCAGGGCGAT
TTCATCCACT TCCGCTTCCG GGCCAACGCG TTCCTGCACC ATATGGTCCG CAACCTGATG
GGCTGTCTCG TGGCCGTAGG CCGGGGTCGA TATCCGGCCG CCTGGCTCTC GGAAGTCCTG
CACGGCCGCG ACCGCAATCG CGCGGCGCCT ACCTTCATGC CCGACGGGCT GTATCTCGCT
CAAGTGGGCT ATCCTGAGAC GTTTGCCGTG CCCGCGCCGC AGGCGGGCAG CGTTCCCTGG
AGCACCGTTT GGACAGACTC ATGA
 
Protein sequence
MTRIALGIQY DGAAFCGWQS QPHGKTVQDE LERALREFAL TPLQTVVAGR TDTGVHGLGQ 
VVHFDTELDR AEFSWVRGTN AFLPSTVAVQ WAKPMPDAFH ARFSAFERTY YYALYVHPVR
SPMLASRAGW IHTPLDVDAM REAAACLIGE HDFSAFRSSE CQSKTPVKHL YQIDIRPQGD
FIHFRFRANA FLHHMVRNLM GCLVAVGRGR YPAAWLSEVL HGRDRNRAAP TFMPDGLYLA
QVGYPETFAV PAPQAGSVPW STVWTDS