Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4292 |
Symbol | |
ID | 6245816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1303490 |
End bp | 1305271 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642596048 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001860455 |
Protein GI | 186473113 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.185481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTAA GCAAGAGGCT GGCGGCGCTG CCGCTCACAG CCCTGGTCAC ACTTGCGTCC GCGCAACGCG CCCCATCCCC GGCAGACGAA GCGGCAGCAG CACGGGCGAA TGCGGAACAG AACCAGCAGT TAAAACAGCA ACGCGACGCG CAGCAGCGGG AGCAGGCCGT CAATGCGCCA GCCGTGCGCT CAACCGTGCC GAACGCCGGA GTCTATCCCG ACCTTCCACA CGAATCACCG TGCTTTCGCA TCGACACGTT CACGCTTGAC GTGCCTGCGA CACTGCCCGA TGTCGCGCGC AAGAACGGCG CATCCAACCT GCCGCTCGAT CCTTTCTGGT TCGCGCGCGA ATGGCTCGAC CACTACCGGC GCGAGTGCAT CGGCAAGGCC GGACTTGACG TGCTCACGAA GGGCCTGCAA CAGGTGATCC TTTCACGCGG CTACGTGACC ACGCGCGTCC TGCTGCCCGA ACAGGACGTA TCGACAGGCA TTCTGAAAGT TGCGCTCGTG CCTGGTACCG TGCGGCATCT GCGCTTTGCT GACCCCGACA CGCGCGGGAC ATGGAAGTCC GCATTCCCTG CACGCGACGG CGACCTGCTG AACCTGCGAG ACCTTGAGCA GGGGCTGGAG CAGATGAAGC GCGTCGCGTC CCAGGACGTG GACATGAAGA TCGAGCCCAC CGAAGCGCCA GGCGAGAGTG ACGTGGTGCT GAACGTGAAG CGCGCGAAAC CCTGGAGCTT CGTCGCATCG GTGGACAACT CGGGTACGAA GGCGACGGGC AAATGGCAGG GCAACGTGAG CCTCGGCCTC GACAACCCGC TCGGGCTGAA CGACACATTG ACGGCCGGCG CGAATCAGGA CCTGTCATTC GGCAACAAGA CGCTCGGCTC ACACGGCTTC AACGGCTCGT ACTCCGTGCC GTGGGGCTAC TGGACGGCGA CGCTGTCGGG CAACACGAAC ACCTACTACC AGAACATTGC GGGCGTGAAC CAGACTTTCG TATCGAGCGG CAACGCGCAG ACGGCCGCGT TCCGTCTCGC GCGCGTGCTC TCGCGTAGCC AGAACGACGT GTTCAGCATG GAGCTGCAAC TGTCGAAGCG CTTCGGCGAG AGCTTTATCG AAGGCACGTC GATCCCGATC CAGGACCGCA ACAACACGTT CGTCGAGGCG GGGCTGACCG ACCGCCACTA CTTCGGCGCA GCGCAGTTCG ACGGAACACT GGCATACCGG CAAGGCATTC ACGGCCTGGG CGCAACGGGC GACCCCGACC CGAGCCTGTA CGCATCGACA GACGACGGCA AGCCACTGCC CACCTACCTG TACAGGATGC TCGTGCTCGA CGCTAACCTG TCGGTGCCGT TCGCCATTGC GACGCAAAAC TTCCGCTACC TGTCGACCGT TCACGGCCAG TTCACGAACG ACCGGCTGTT CTTCATCGAC GATCTGACCA TCGGCAGCCG CTACACGGTG CGGGGCTTCG ACGGCGAAAC GATGCTCGCG GCAGAGAAAG GTTTCTACTG GCGCAATGAA CTGCAATGGC CCATCTTTCA GACGGGTCAG ACGTTATACG CAGGCATCGA CTACGGGCGC GTGTTCGGGC CGAACACGGC GATTCTGGCG GGCACCCAAC TCGCGGGCGC GGTGATTGGC ATCCGTGGCG GCATTCCGGC GAAGTACGCG GGGTTCTCGT ATGACCTGTT CGCTGGAACA CCCATCTACA AACCCGCAGG TTTTCCGACC GCGCGCGTCA CGGCCGGCGT CCAGGCCACA ATGCAGTTCT GA
|
Protein sequence | MKLSKRLAAL PLTALVTLAS AQRAPSPADE AAAARANAEQ NQQLKQQRDA QQREQAVNAP AVRSTVPNAG VYPDLPHESP CFRIDTFTLD VPATLPDVAR KNGASNLPLD PFWFAREWLD HYRRECIGKA GLDVLTKGLQ QVILSRGYVT TRVLLPEQDV STGILKVALV PGTVRHLRFA DPDTRGTWKS AFPARDGDLL NLRDLEQGLE QMKRVASQDV DMKIEPTEAP GESDVVLNVK RAKPWSFVAS VDNSGTKATG KWQGNVSLGL DNPLGLNDTL TAGANQDLSF GNKTLGSHGF NGSYSVPWGY WTATLSGNTN TYYQNIAGVN QTFVSSGNAQ TAAFRLARVL SRSQNDVFSM ELQLSKRFGE SFIEGTSIPI QDRNNTFVEA GLTDRHYFGA AQFDGTLAYR QGIHGLGATG DPDPSLYAST DDGKPLPTYL YRMLVLDANL SVPFAIATQN FRYLSTVHGQ FTNDRLFFID DLTIGSRYTV RGFDGETMLA AEKGFYWRNE LQWPIFQTGQ TLYAGIDYGR VFGPNTAILA GTQLAGAVIG IRGGIPAKYA GFSYDLFAGT PIYKPAGFPT ARVTAGVQAT MQF
|
| |