| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4219 |
|---|
| Symbol | araH |
|---|
| ID | 6245747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1210658 |
|---|
| End bp | 1211674 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595979 |
|---|
| Product | L-arabinose transporter permease protein |
|---|
| Protein accession | YP_001860386 |
|---|
| Protein GI | 186473044 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.645331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC CGAGCACACG TCCGGCGACC GAGCCGGCAG TCCAACACGC CGCATCGCCC
GGCGCGGCCG CGCGCGCGGC CCGCACGTGG GATCTGATCA ACAAGTCGGG CATCGTGATG
GTGTTCGTCA TCCTGTTCGC GGTGCTGTCA TTCGCGGTGC CCGACTTTCT GACGAGCCGC
AACATGCAGG GCCTGTTGCT CTCCGTGACG CTGATCGGCT CGATCTCCGT GACGATGATG
TTCGTGCTGG CGCTCGGCGA AGTCGATTTG TCGGTGGCGT CGATCGTCGC TTTCGCGGGC
GTGGTGGCCT CTACGTTGAT CACGGCCACG CATAGCGTGA TGCTCGGCGT CGCCGCGGGC
GTGCTGGCGG GTGGCGCGGT CGGCCTCGTG AATGGTGTGC TGATCGCGCG CTACAAGATC
AATTCGCTGA TCGTCACGCT CGCCATGATG GAAGTGGTGC GCGGCCTCGC ATTCATCACG
TCGAACGGGG ACGCGGTGAT GATTTCCGAA GAGAGCTTCT TCGATCTGGG CGGCGGCTCG
TTCCTCGGCA TTTCGTATCC GATCTGGAGC AACATCGTCG GCTTCGTGCT GTTCGGGTTC
CTGCTGCGTA AGACCATATT CGGCAAGAAC GTGCTCGCAG TAGGCGGGAA TAGCGAGGCT
GCGTTGCTAG CCGGTCTGCC CGTCACGCGC ATCAAGATCA CGGTGTTCGT GCTGCAAGGG
CTCGTGACGG GTTTCGCGGG CGTGATGCTC GCGTCGCGGA TGAGCCTCGG CGATCCGAAG
ACGTCGGTGG GTCTTGAACT CGGCGTGATT TCGGCGTGCG TGCTGGGCGG CGTGTCGCTG
ACGGGCGGCG TCGCGACGAT TTCCGGCGTG CTGGTCGGCG TGCTCATCAT GGGCTCGGTG
CAGGACGCGA TGAGCCTGCT CAATGTGCCC ACGTTCTATC AGTATCTGAT TCGCGGCGGT
ATCCTGCTGC TGGCTGTTCT TTTCGATCAG TTCCGACGGA GCAAGCGGAA GGTTTGA
|
|---|
| Protein sequence | MQTPSTRPAT EPAVQHAASP GAAARAARTW DLINKSGIVM VFVILFAVLS FAVPDFLTSR
NMQGLLLSVT LIGSISVTMM FVLALGEVDL SVASIVAFAG VVASTLITAT HSVMLGVAAG
VLAGGAVGLV NGVLIARYKI NSLIVTLAMM EVVRGLAFIT SNGDAVMISE ESFFDLGGGS
FLGISYPIWS NIVGFVLFGF LLRKTIFGKN VLAVGGNSEA ALLAGLPVTR IKITVFVLQG
LVTGFAGVML ASRMSLGDPK TSVGLELGVI SACVLGGVSL TGGVATISGV LVGVLIMGSV
QDAMSLLNVP TFYQYLIRGG ILLLAVLFDQ FRRSKRKV
|
|---|
| |