Gene Bphy_4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4218 
SymbolaraG 
ID6245746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1209018 
End bp1210580 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content63% 
IMG OID642595978 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_001860385 
Protein GI186473043 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.231533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.845406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA CGATGAACGC GAATGACGCC GCCAGCGAAC AAGTTGTCGC TCCTCTGGAA 
CAGCCGTTGA CGGCGGCCGC CACGCATCTC GAACTCGACG GTATCACCGT CGCGTTCCCG
GGCGTGGTGG CGCTCGACAA CGTGTCGTTC GAAGTGCGCG GCGGTGAAGT GCACGGCCTG
ATGGGCGAGA ACGGCGCGGG CAAATCGACG CTGCTGAAAG TGCTGTCCGG TGTGAACCAG
ACGCAGTCCG GCGCGTTGCG CCTCGCCGGC GTCGAGCACA GGTTCACGAC GACCAAGGCC
GCGATCGAGG CGGGCATTGC GATCATCTAT CAGGAACTGC ATCTCGTGCC CGAGCTGACG
GTCGCTGAAA ACCTGATGCT CGGGCAGTTG CCGAACCGTT TCGGCGTGCT CGACGAGAAG
GCGCTCGTCA AGCGCGCAAT GACGGAACTC GAGCGTCTCG GCGAATCGAT CGATCCGAAC
GCACAGGTGA AGAGCCTGTC TATCGGCCAG CGGCAGATGA TCGAGATCGG CAAGGCGTTG
ATGCGCGACG CGCGCGTGAT TGCGTTCGAC GAACCAACCA GTTCGTTGTC GGCGCGCGAA
ACGGAACGGC TCTTCAAGAT CATCAATGCA TTGCGCGCCC AGGGGCACGC GGTGATCTAC
GTTACGCACC GGATGGACGA GGTGTACGAA CTGTGCGACC GCGTCACCGT GTTCCGTGAC
GGCCGCCGGA TCGAAACATT CGACTCCGTG GCGGACCTGG ACCGTGACCG CCTGATCAGC
TGCATGGTCG GTCGTTCGAT CCGTGACGTA TATGGTTATC GTCCGCGCCA GGCGGGCGAA
GTTCAGATCG AAGCGAAGCA GTTGATGGGG CCGGGGCTCT CCGCTCCCGT CTCCTTCACT
GCGCGCAAAG GCGAGATCGT CGGCTTCTTC GGACTCGTGG GCGCGGGGCG TTCCGAGTTG
ATGAAGCTGC TGTATGGCGC CACGCAGCCG ACGGGCGGCC ACGTCGAACT GAATGGCAAG
CGCGTGTCGT TCTCCACGCC ACGCGACGCC GTGCGCGCGG GCATTGCGCT GTGCCCGGAA
GATCGCAAGC AGGAAGGCAT CGTCGCGATC GCGTCGGTGG CCGACAACTT GAACATCAGC
GCGCGGCGAC ACTTCAGTCC GTTGAGCTTT CTGCTGAACA GCAAGCGCGA ACGCGACCTC
ACGCGCGAAT ACATCGATAA GCTGTCGATC AAGACGCGCA ACACTGAAAC GGTGATCGGC
ACGCTGTCGG GCGGCAACCA GCAGAAGGTG ATTCTGTCGC GCTGGCTCGC AGAACGCATC
GACGTGTTTC TGCTGGACGA ACCGACGCGC GGCATCGACG TCGGCGCGCG CGCGGAAATC
TACGATCTGC TGTATGACCT CGCGGAAGCG GGCCGCACGG TGATCGTCGT ATCGAGCGAT
CTGGCGGAAG TGATCGGCGT CGCGGACCGC GTGCTGGTGA TGAAGGAAGG ACGCATCGTC
GGCGATCTGC CGAAGGCGCA GGCCACGCCC GATCAACTGA TCAAACTCGC ATTGCCGCAA
TGA
 
Protein sequence
MQNTMNANDA ASEQVVAPLE QPLTAAATHL ELDGITVAFP GVVALDNVSF EVRGGEVHGL 
MGENGAGKST LLKVLSGVNQ TQSGALRLAG VEHRFTTTKA AIEAGIAIIY QELHLVPELT
VAENLMLGQL PNRFGVLDEK ALVKRAMTEL ERLGESIDPN AQVKSLSIGQ RQMIEIGKAL
MRDARVIAFD EPTSSLSARE TERLFKIINA LRAQGHAVIY VTHRMDEVYE LCDRVTVFRD
GRRIETFDSV ADLDRDRLIS CMVGRSIRDV YGYRPRQAGE VQIEAKQLMG PGLSAPVSFT
ARKGEIVGFF GLVGAGRSEL MKLLYGATQP TGGHVELNGK RVSFSTPRDA VRAGIALCPE
DRKQEGIVAI ASVADNLNIS ARRHFSPLSF LLNSKRERDL TREYIDKLSI KTRNTETVIG
TLSGGNQQKV ILSRWLAERI DVFLLDEPTR GIDVGARAEI YDLLYDLAEA GRTVIVVSSD
LAEVIGVADR VLVMKEGRIV GDLPKAQATP DQLIKLALPQ