| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4149 |
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| Symbol | |
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| ID | 6245677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1139220 |
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| End bp | 1140185 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595909 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001860316 |
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| Protein GI | 186472974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0138672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAC ATCGCATGTT CACACGCCGA ACCTTCCTGG CAGGAACCGG CGCACTCCTG
GCCTCGACCG CGTTTTCTTC ATTCGCCGAT AGCCGTGCAA AAGAAATTCG CATCGGATAT
CAAAAGGCCG CAAGCACACT GGTGCTTTTG AAGGCACATG GAACGCTCGA AAAGCGCTTC
GCCGCTCAGG GCGTCAGTGT GAAATGGACG GAATTTCCTG CTGGTCCGCA GTTGCTTGAA
GGACTGAATG TCGGTTCGGT CGACTTCGGT TACGTTGGGG AGGCGCCTCC CGTCATCGCG
CAAGCCGCTG GCGCCAATTT CGTGTACACC GCGTATGAAA TTCCAACGCC GCAAGCCGAA
GGCATTCTTG TCCATCGCGA CGCACCGATT CAATCCGTTG CGGACCTGAA GGGGAAGCGC
GTAGCGTTTA ACAAGGGCTC CGACGTTCAT TGGTTTCTCG TCGCCGCGTT ACAGAAAGCC
GGCGTGAGCT ACCCCGATAT TCAGCCCGTT TTTCTGCCGC CCGCCGATGC GCGGGCGGCG
TTCGAGCGCG GGGCAATCGA TGCATGGGCC ATTTGGGATC CGTTCCTCGA AGCAGCAAAG
CGGCAATCGA ACGCGAGACT TTTGACCGAC GGTACGGGCA TCGTCAATCA CCACCAGTTC
TTTCTCAGCG CGCGCTCTTT CGCGCAGCAA AACCGGGGGC TGCTCGATGC CGTCGTTACC
GAAGTCGGGA AGGAAGGCGC GTGGGTTCGT GGACACTACG CAGAGGCGGC GGCACAGCTC
GCGCCGATTC AGGGGCTCGA CGCGAATGTC ATCGAAGCGG GCCTGCGACA CTATGCTCAT
GTCTACAAGC CGATCGATGC GGGTGTGCTG GCTGAACAGC AAAAGATCGC CGATGCGTTC
ACTGAGCTTC GCATCATTCC GACGAAGATC GTGACGAAGG AAGCGGTGCT CGACGCGAAG
GCTTGA
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| Protein sequence | MSQHRMFTRR TFLAGTGALL ASTAFSSFAD SRAKEIRIGY QKAASTLVLL KAHGTLEKRF
AAQGVSVKWT EFPAGPQLLE GLNVGSVDFG YVGEAPPVIA QAAGANFVYT AYEIPTPQAE
GILVHRDAPI QSVADLKGKR VAFNKGSDVH WFLVAALQKA GVSYPDIQPV FLPPADARAA
FERGAIDAWA IWDPFLEAAK RQSNARLLTD GTGIVNHHQF FLSARSFAQQ NRGLLDAVVT
EVGKEGAWVR GHYAEAAAQL APIQGLDANV IEAGLRHYAH VYKPIDAGVL AEQQKIADAF
TELRIIPTKI VTKEAVLDAK A
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