| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4022 |
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| Symbol | |
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| ID | 6245552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1000935 |
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| End bp | 1002443 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642595784 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001860191 |
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| Protein GI | 186472849 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.578632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC AATCAAATGC CGGACGGCGC GCTTCCGGCG CGCTGAAAAT GGGCGTGTCC
GTGATGTTCG CTGCCGTGCT GTCGGCGTGC GTCAACTACG CGGGCATTCA TAGCGATGCG
AAGACGACCG AACCGCAGCA GTACGCGACG CAGCAAAGCA TTCCCGCCGA GTCGGGCCAT
TGGCCTGCCG CCAATTGGGC CGATCAGTTC GGCGACGCGC AACTGAAGGC GCTGATCGAC
GAGGCACTGA AGGGCAGTCC GACGCTTGAA CAGGCCCGCG CCCGTGTGGC ATCGGCGTCG
GCGTATAGCG AAACGGCGAA GGCAAGCACG ATGCCGCGCG TCGACGCCGA CTATTCGCTT
ACGCGTCAGC AGTATTCGGG CACCGCGCTC GTGCCGCCGC CGACGGGTGG CTCGTGGCAG
ACGGAGAACA AGGGTCTGCT GAGCGCTTCG TACGATCTCG ACCTGTGGGG CAAGAACCGC
GAAGCGCTGA AGGCGGCGAT CTCGCAACTG CAGGCGAGCC AGGCCGATGC CGAAGTCGTC
AAGCTCACGC TGACGACTTC GATTGCGCGC ACGTACAACC AGCTTGCGCG TCTGTATGCA
TTGCGCGATA TCGCGCAGCA GGAGATCGTA CAGCGCGAAC AGATCGACAG AATTACGGCG
GGCCGCATCG CGACGGGCCT CGATACGGAA GTCGAGCGCA AGACGGCTCA GGCGAATCTC
GCGACGAGCC GCGCCACGTT GAAGTCGCTC GACGGTCAGA TTCTTGCCAC GCGATATCAG
ATCGCCGCGC TGCTCGGCGC TGGCCCGGAC CGTGGACTGC AGATCGCGCG TCCCACGCTC
GGCATCGGCG ACGACGTGAA TCTGCCCGAC AACCTCCCCG CGGATCTGGT AAGCCGCCGT
CCCGACATCG TCGCCGCACG CTGGCGCGTC GATGCAATGA CGCACGACGT AAAGGAGGCG
AAAGCCGAGT TCTATCCCGA CATCAACCTG AGCGCGGCGA TCGGACTCGA CGCGTTCGGT
TTCGGCCGAT TCTTGACGGC GGCGAGCCGC ACGGCATCCG TCGGTCCCGC GATACATCTG
CCCATCTTCG ATGCCGGCGA ACTACGCGCG CAACTGAAGG GCCGTTACGC CGATTTCGAC
TATGCCGTCG CAACCTACAA CCAGACGCTC GTTACCGCGT TGAGCGAGGT TGCCACGCAA
CTTGCCGGCG TGCGTTCGAC GGACGGCCAA CTCGTCGACG CGCAAACCGC ACAGGACGCC
GCGCGCCAGG CCGATTCGCT CGCACTCGTG CAATACAAGG CCGGGCTCAC GAACCAGCTG
ACGGTATTGA ATGCCGATGT GAATGCGCTT GCCGCCGATC AGGCCGTTGC GAACCTGCGA
ATGGACCGCC GCGATCAGCA GATCGCGCTG GCATCCGCGC TGGGCGGCGG CTTCGTCGAT
ACCTCGAACA CGGACCAGAA CGCGCACGTC ACGTCCGCCC CTGAAACGTC TGCCAACGCC
GCGCATTGA
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| Protein sequence | MKNQSNAGRR ASGALKMGVS VMFAAVLSAC VNYAGIHSDA KTTEPQQYAT QQSIPAESGH
WPAANWADQF GDAQLKALID EALKGSPTLE QARARVASAS AYSETAKAST MPRVDADYSL
TRQQYSGTAL VPPPTGGSWQ TENKGLLSAS YDLDLWGKNR EALKAAISQL QASQADAEVV
KLTLTTSIAR TYNQLARLYA LRDIAQQEIV QREQIDRITA GRIATGLDTE VERKTAQANL
ATSRATLKSL DGQILATRYQ IAALLGAGPD RGLQIARPTL GIGDDVNLPD NLPADLVSRR
PDIVAARWRV DAMTHDVKEA KAEFYPDINL SAAIGLDAFG FGRFLTAASR TASVGPAIHL
PIFDAGELRA QLKGRYADFD YAVATYNQTL VTALSEVATQ LAGVRSTDGQ LVDAQTAQDA
ARQADSLALV QYKAGLTNQL TVLNADVNAL AADQAVANLR MDRRDQQIAL ASALGGGFVD
TSNTDQNAHV TSAPETSANA AH
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