| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3899 |
|---|
| Symbol | |
|---|
| ID | 6245434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 870606 |
|---|
| End bp | 873071 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595666 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_001860073 |
|---|
| Protein GI | 186472731 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACAGT CAGTACTGTC GTTTTTCCGG GAAATATCCG CGAGGGCGTG GGACCACGCG
AAGCCGCAGG TGACGAGCGC GTTGCAACGT TTGCGCCGTC CAACGTGGCG CGGCGTCGCG
TTGTCGGTCG CCGCCATTCC CGCACTCGTG GTGCTTTATG TGCTGATCCT GATTCCGTTC
ACGCCGGGCA TCGGGGACAT CCGCAAGGCG AAGATCGAGC AGCCCGCGCA GATCTATTCG
GCGGACGGCA AGCTGCTTGC CGAATTCAAG CCGACCAACC GCGTGTGGGT GAAGCTCTCT
GACATCTCGC CGCACGTCGT CGACGCATTG ATCTCCACTG AAGATCACCG CTTCTACGAG
CATCACGGCA TCGACTTCAA ACGCACGGCG GGGGCAGCGC TGCATACGTT CTCGGGCGAC
CGTCAGGGCG GTTCGACGAT CACGCAGCAG CTTGCACGCA ATCTGTATCC CGACGACATC
GGCCGCGCGC CTACTCTCAC GCGCAAGATC AAGGAAGCGA TCACGGCGTT CAAGATCGAA
GCCATTTATA CGAAGGGCGA GATTCTCGAA ACGTATCTGA ACACGGTGCC GTTCCTCTAT
AACGCGTACG GCATCGAAAT GGCGGCGCGC ACCTATTTCG ACAAGTCGGC CGACGACCTC
AGCGTGCTTG AAAGCGCGAC GCTGATCGGC ATGCTGAAGG GCAACAGCTA TTACAACCCC
GTGATCAATC CCGAGCGCGC GCTGGACCGC CGCAATATCG TGCTTGGTCA GATGGTGAAA
TACGGGCGTC TTTCGCAGGC GCAATTCAAT TCGCTGAAGG GCAAAGCGTT GCGCGTCGAT
TTCGAGCGGC AAACCGAGCC GCCCGGTCCC GCGCCCCATT TCGCGCAGCA ATTGAAGAAG
TGGCTTATCG CATGGGCCGA CGCGCACGAT TACAACATCT ATGCCGACGG ACTCGTCGTG
CGCACGACGA TCGATGCGCG TCTGCAAACG ATGGCGACGC AGGCGCTGAC GTTCCAGGGC
AATCAGCTGC AGTCGATCGC GAATGCGGCG TGGAATGCCC GCAGCGCATG CTCGGGCCAT
AAAGACGTGT TCGACGCGTT CATTCGTGAG ACGCCCGAAT ACCGTAGCGC GAAAGACTCG
GGCATGAGTG ATGGAGATGC GCTCAAGCAT CTGAGCGCCG ATCGCGGGTT CATGAAGACG
CTGTGCGATA GCAAGACGCG CGTGCAGGCC GCGTTCGTCG CGATGGACCC GCGCGATGGC
GCGATCAAGG CGTGGGTGGG CAGCCGCGAT TTCGCGCAGG ACCCGTACGA TCACGTATCG
CAGGCGCGCC GCCAGCCGGG CTCGACGTTC AAGCCGTTCG TCTATGGCGC GGCCTTCGAG
CAAGGTGCAA AGCCCGACGA CACGTTCCCC GATCAGGCTG TCGAAATCCC GCTGGCTGGC
GGTGAAATCT GGCGGCCCAG CGACGAAGAC GCGCCGAGCG GCCGTCCCAT CACGTTGCGC
GACGGCCTTG CGTATTCGCG CAACCGCATC ACGGCACAAT TGATGGAGTC GGTCGGTCCC
GCGAAGGTCG CGCGGCTCGC GCGCGCGATG GGCGTGCGCG ACAGCCACCT GGACGCGGTG
CCTTCGCTGG CCCTGGGCAC GAGCCCTGTG ACGTTGAAGG AGATGGTGTC GTCGTACGGC
ACGATCGCCA ACGAAGGCGC GTACGTCGCG CCGATGCTCG TCACACGGAT CGAAGACCGC
AAGGGCGAAG TACTCGCCGA GTTTCAGCCG GCGCACGCCG ATCGCGTGAT GCCCGCCGCG
AGCGCGCAGA CCTTGCTCGA CGTGATGCGC TCGGTCGTCA ACAAGGGAAC GGGCTCGGCC
ATTCGGACGC GTTTCGGCAT CCGCGCCGAT GTCGCCGGCA AGACGGGCAC GACGCAGGAC
AATGCGGACG GCTGGTTCAT CCTCATGCAT CCGCAGCTCG TCGCGGGCGC GTGGATCGGC
TTCAACGACA GCCGTGTGAC GCTGCGCAGC GATTACTGGG GGCAGGGCGC GCACAGCGCG
CTGCCGATCG TCGGCGATTT CTTTCAGCGT TCGCTGCGCT CGCGGCTGAT CGACCCGCGC
GTGAAGTTCG CGCAAGAGCC GCCGCCCGGC ATGTTCGATA CGCTGCGGAT GAAGCTGCGC
GCGTGGATGC AGTATCTGTT CACGTCGTCG AGCAAGCCGG AGACGCCTGC GCCAGCGCCG
CGCCCGAAGC CTCGTTCTGC ACCCGCGCCA GCTGCGTCGG CCGTGGAGAA TGCCTCTCCC
GTTGCAGAGG CGTCTGCGCC GACCGACATC GAGCCGCCGC AGATCGTTTC GCCGGCTGCT
TCGCAGCCGC CTATCCTGCC GTCGCCGGGC GAAGCGAGCG CGCCTGCGGC TGCGAATAGT
GAAGCGCCTG CGTTTGCATC GACGCCTGCG GCAAATCCCG CCAGCACACC CGCATCAGAG
CCTTGA
|
|---|
| Protein sequence | MRQSVLSFFR EISARAWDHA KPQVTSALQR LRRPTWRGVA LSVAAIPALV VLYVLILIPF
TPGIGDIRKA KIEQPAQIYS ADGKLLAEFK PTNRVWVKLS DISPHVVDAL ISTEDHRFYE
HHGIDFKRTA GAALHTFSGD RQGGSTITQQ LARNLYPDDI GRAPTLTRKI KEAITAFKIE
AIYTKGEILE TYLNTVPFLY NAYGIEMAAR TYFDKSADDL SVLESATLIG MLKGNSYYNP
VINPERALDR RNIVLGQMVK YGRLSQAQFN SLKGKALRVD FERQTEPPGP APHFAQQLKK
WLIAWADAHD YNIYADGLVV RTTIDARLQT MATQALTFQG NQLQSIANAA WNARSACSGH
KDVFDAFIRE TPEYRSAKDS GMSDGDALKH LSADRGFMKT LCDSKTRVQA AFVAMDPRDG
AIKAWVGSRD FAQDPYDHVS QARRQPGSTF KPFVYGAAFE QGAKPDDTFP DQAVEIPLAG
GEIWRPSDED APSGRPITLR DGLAYSRNRI TAQLMESVGP AKVARLARAM GVRDSHLDAV
PSLALGTSPV TLKEMVSSYG TIANEGAYVA PMLVTRIEDR KGEVLAEFQP AHADRVMPAA
SAQTLLDVMR SVVNKGTGSA IRTRFGIRAD VAGKTGTTQD NADGWFILMH PQLVAGAWIG
FNDSRVTLRS DYWGQGAHSA LPIVGDFFQR SLRSRLIDPR VKFAQEPPPG MFDTLRMKLR
AWMQYLFTSS SKPETPAPAP RPKPRSAPAP AASAVENASP VAEASAPTDI EPPQIVSPAA
SQPPILPSPG EASAPAAANS EAPAFASTPA ANPASTPASE P
|
|---|
| |