Gene Bphy_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3891 
Symbol 
ID6245427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp864601 
End bp865386 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID642595659 
Productaldolase II superfamily protein 
Protein accessionYP_001860066 
Protein GI186472724 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG CGACTGCGCC ATCTGCCGGC TACAGCAGTG AAGAATGGAC GACGCGCTGC 
GAGCTTGCCG CGCTGTATCG GCTCGTCGCG CATTTCCGCA TGACGGATCT GATCGATACG
CACATCACCG CACGCGTGGC CGGGCCCGCT CATCACTTTC TGATTAACCG CTATGGCGTG
CTCTTTCACG AAATGCGCGC GTCGGATCTT GTGAAGATCG ATAGCGACGG ACGCGTCGTC
GAACCAGCAA ACACAATTGC CGCCGATCCG AAGCGCTTTC GCGTGAATGC GGCTGGCTTC
ACGATTCACT CGGCTGTGCA CATGGCGCGG CCCGACATGC GCTTCGTGAT TCACACGCAT
ACGTCGGCAG GATCGGCCGT GTCGGCGCAA AAGCAAGGCT TGCTGCCCAT CAGCCAGCAC
GCGCTGAAAT TCTACGGCGC GCTCGCGTAT CACGACTACG AAGGCATTGC GCTCGATCTC
GGCGAGCGTG AACGGCTCGT GGCCGATCTG GGTCCGCACA ACGCGATGAT TTTGCGCAAT
CACGGACTGC TGGCGGGCGG CACTTCGGCG GCAACCGCGT TTCAGGAAAT CTACTTTCTC
GAGCGCGCAT GCCAGATCCA GATCGATGCA CTCGCGGGCA ATGCGGAATT GACACTGCCG
CCCGAGCATG TGCGAAAGCT GACCGCGAGC CAGTTCGCGC GCGACGACGA AGCTGGGATC
GCGGAACTCG CGTGGGAAGC AGCGCTGCGG CTGATCGACA ACACCGTTTC CGATTACCGA
AGCTGA
 
Protein sequence
MSNATAPSAG YSSEEWTTRC ELAALYRLVA HFRMTDLIDT HITARVAGPA HHFLINRYGV 
LFHEMRASDL VKIDSDGRVV EPANTIAADP KRFRVNAAGF TIHSAVHMAR PDMRFVIHTH
TSAGSAVSAQ KQGLLPISQH ALKFYGALAY HDYEGIALDL GERERLVADL GPHNAMILRN
HGLLAGGTSA ATAFQEIYFL ERACQIQIDA LAGNAELTLP PEHVRKLTAS QFARDDEAGI
AELAWEAALR LIDNTVSDYR S