| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3889 |
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| Symbol | |
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| ID | 6245425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 863127 |
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| End bp | 863831 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642595657 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001860064 |
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| Protein GI | 186472722 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGATT CCATTCTGAG TCCGCGCGAC TTCGATTCGC ACCCCGCCTA TGTCCATGCC
CCGTATGGAT CGTCCGTCAA GCGCGGCCCG ACGCGTCCGC TGATCCCGCT GAAAGAGCGC
CTGCGCGACC AGCGCGTGCC CGTCTACGGC GCGGAAGATC TCGGCGCGCT CGACAACGAC
CTGACGCGCA ATGCCGTAAA GAACGGCGAG CCGCTCGGCG AGCGCATCAT CGTCACGGGC
CGCGTGCTCG ACGAAGGCGG CCGCCCGGTG CGCAACACGC TGGTGGAAGT GTGGCAGGCG
AACGCCGCCG GCCGCTATGT GCACAAGAAC GACCAGCACG ACGCGCCGCT CGACCCGAAC
TTCCTCGGCG CGGGCCGCTG CCTGACCGAT AACGAAGGCC GCTACCGCTT CATGACGATC
AAGCCCGGCG CCTATCCGTG GGGCAATCAT CCGAATGCAT GGCGTCCGAA TCACATCCAC
TTCTCGCTGT TCGGCGACTA TTTCGGCTCG CGTCTCGTCA CGCAGATGTA CTTCCCCGGC
GATCCGCTGC TCCAGTACGA CCCGATCTTC CAGGGCACGC CGGAAGGCGC ACGTGACCGT
CTGATTTCAC GCTTCACGCT CGACGTGACG GAAGAGAACT ACGCGCTCGG CTACGAATTC
GACATCGTGC TGCGCGGTCC GAACGAAACC CCGATGGAGC GCTAA
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| Protein sequence | MDDSILSPRD FDSHPAYVHA PYGSSVKRGP TRPLIPLKER LRDQRVPVYG AEDLGALDND
LTRNAVKNGE PLGERIIVTG RVLDEGGRPV RNTLVEVWQA NAAGRYVHKN DQHDAPLDPN
FLGAGRCLTD NEGRYRFMTI KPGAYPWGNH PNAWRPNHIH FSLFGDYFGS RLVTQMYFPG
DPLLQYDPIF QGTPEGARDR LISRFTLDVT EENYALGYEF DIVLRGPNET PMER
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