| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3819 |
|---|
| Symbol | |
|---|
| ID | 6245357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 782841 |
|---|
| End bp | 783791 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595589 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001859996 |
|---|
| Protein GI | 186472654 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.166193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.37605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC ATCAGCTCCG CGCGCTGGTC GCCGTAGCGG ACGCGGGCAG CGTGCGCGGT
GCAGCGCGGC TGCTCGACAC GTCGCCTGCC GCGATCACGC AAAGCCTCCA GTTGCTGGAG
GAGTCCATCC AGATGCAGCT GGTTTTACGC ACGTCGTCCG GCGTCACGCT CACCGAATGC
GGGCAAACCC TGCTGACGCA TGCGCGTCTG ATCGTGTCGC AAATGACGCG CGCTCATGAA
GCGCTCGATG CGTTGCGCGG CATTCCTCGC AGAAGGCTGT CCGTGGCCGT GACCGCGTGG
GTGGCACTGA CGTTCCTGCC GGAGACGGTC GCGCGTTTCC GCGAGCGTAT GCCGCAGATT
CAGCTCGAAC TATTCGAAGG TTTGCTTGCG ATTGCGAATC CGCGCCTGCG CGACGGCAGC
CTCGATATCT ACATCGGCCG GCAGTCGCCT GGCGCGGCGA GCGGCGCGTT CACTTATCAG
CCGGTGTTTG CATCGAGCCG CGCAGTGGTC GCGCGCAACG GTCATCCGAA TGCGGCAAGC
CGCTCACTGG CTGACCTGCT CGAACTCGAC TGGCTGGTTG CACTCGATCC CGAGACGGAA
GGGCAGGCGC CGTACCGGAC GTTCGCGCAA TATGGCTTGC CCGTGCCGCG GAGCATTCAC
TATCTGCACT CGCTGGCGGT GGCCGTGCCG TTGCTCCGCT ATACCGACAT GGTCAGTATC
TTTCCGTGGC CTCTGGTGGA GTTGTGCGCG CAGCGCGACG ATCTGTGCGC GCTGCCGTTG
CGAGAACAGC TCGACGATTC ACTCGTCGGC ATCATTACGC GCAACGGCGA GCCGCCCGAT
GCGGCGTCGC GCTGCTTCAT AGACTGTTTC ATTGAAACGG TTCGCGGCGA GAAGTGGATG
GCGTCAGCCC ACATTCGCCG CGCGATGCAC TCGGTCGAGA TACTCGTCTA G
|
|---|
| Protein sequence | MKTHQLRALV AVADAGSVRG AARLLDTSPA AITQSLQLLE ESIQMQLVLR TSSGVTLTEC
GQTLLTHARL IVSQMTRAHE ALDALRGIPR RRLSVAVTAW VALTFLPETV ARFRERMPQI
QLELFEGLLA IANPRLRDGS LDIYIGRQSP GAASGAFTYQ PVFASSRAVV ARNGHPNAAS
RSLADLLELD WLVALDPETE GQAPYRTFAQ YGLPVPRSIH YLHSLAVAVP LLRYTDMVSI
FPWPLVELCA QRDDLCALPL REQLDDSLVG IITRNGEPPD AASRCFIDCF IETVRGEKWM
ASAHIRRAMH SVEILV
|
|---|
| |