Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3794 |
Symbol | |
ID | 6245332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 756290 |
End bp | 759037 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642595564 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) |
Protein accession | YP_001859971 |
Protein GI | 186472629 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCG CGCGCCTCGT CCTGCTACCG CTGGTGATTC TGCTGACCGG GTTGACGATC ACCTGGTCAG TGTGGGATCA CGAGCGTCAG GCCGTGCGGC GCGAACTGCT CTCCGAATTC AATTTCGCAC TGGGCGATGC CGTTAGCCGC GTCGAACAGC GGATGGCGAC CTATGAGCAG ATGCTGCGCG GCGTGCAGGG CATGTTCGCC GCTCGCGGCT CGCTCGATCT CGACGCGTTT CATGGCTACA TCGGCGCCGT CAATGCCGAC TCGAGCGTCG CGGGCATGCA GGCGCTCGGT GTCGTGCAAT GGGTGAGCGC GCAACGGCAC GACGCGCATC TGGCCGAGAT GAACCGCCGC ATCGGCAGGC GCTATGCGAT CAGGCCGCCC GGCGTACGCG ACGGCTACGC GCCCGTGGTC GCGCGCGAGC CGGTGTACGC CGATCCCAAT GCCGTGCTCG GCTACGACAC ATGGTCGAGT CCCGTGCGCC GGCAGGCGCT GGAGAAGTCG CGCGACTCCG GTCTCGCCGT CGTGTCGGGC AAAGTGCAGC TGGCGTCGGA TTCGGACGCA CAGCCCGTGG CAGGCTTCGT GATGTATCTG CCTGTCTATG AACGCGGCGC GCCGCAAGAC ACCGTCGACG AGCGCCGCGC GCATCTGCTC GGCTGGGTCT ACGCGGCTTT TCGCATGCGC GACGTGCTGG CGAGTCTCTA TGGCGATCAG CCTGCCGGGC TTTACCTGTC GATTTACGAC GGCACGCAGC CGTCGGCGGA ATCGTTGTTG TACCGCTCGT CGGAGCCGAA GCTGCGCGAC GTGGTTTCAG CGAACGAATA CCTCGTGGTC GGCGGACACG ACTGGACGCT GTCGATGACG GCGCAGCCCG ACTTCAAGGC ACGCTTCGGC CACAATGCGA AGCTGCTGAT TGCCTGCACG GGCGCGGGCC TGAGCCTGCT GCTCGCGCTG CTTGCCTGGA GCCTCGCGAG CGGCCGCAGC CGCGCGATGC GTCTCGCGTC GAAGATGACA GCCGAAGTAC GCGAGAGCGA GGCCGAATTG CGCATTGCCG CCGTCGCGTT CGATTCGCTC GAGGGCATGA TGGTCACCGA CGCCGACGGC ACGATCCTGC GCGTCAATTC GGCGTTCACC AAATGCACGG GCTATACGGC CGACGACGTG ATCGGCAGGA ACCCGCGCCT GCTCAGCTCG GGCCGTCACG ATGCCGCGTT CTTCCGCGAC ATGTGGGAGA CGATCCACCG TGTGGGCGGA TGGCAGGGCG AAATCTGGGA TCGCCGCAAG AACGGCGAGA TCTATCCGAA GTGGCTGACC ATTACCGCGG TGAAGGCCGT CGACGGCAAT GTCACGCATT ACGTCGGCAC GCACTACGAC ATCACGGAGC GCAAGCTCGC GGAAGAGCAG ATCAAGGAAC TGGCGTTTTT CGACGCGCTC ACGCATCTGC CGAACCGCAC ACTGTTGCGC GACCGGCTGA AGCAGGTGAT CGCGCTTAGC GCGCAGAACC ATACGCACGG CGCGCTGCTG TTCGTCGACC TCGACAACTT CAAGACGCTC AACGACACGC TCGGCCACGA CAAGGGCGAC CTGTTGCTGG GCCAGGTCGC GGTGCGGCTG CTGGGGAGCG TGCGTGAGGG CGATACGGTG GCGCGGATGG GCGGCGACGA ATTCGTGATT GTGCTGAGCG ATCTGAGCCG CAATCGCGAC GAAGCCGCCA GCGAGACGGA GGGCGCCGCT GAAAAGGTGC TGACCGCGCT CTCCAGACCC TACTACCTCG CGGGCACGGA GTTCCGGACA ACCGCGAGCA TCGGCGCGAC GCTGTTCACT GGGCATGAAA CGTCGATCGA CGAACTGCTG AAGCAGTCGG ATCTCGCGAT GTACAAGTCA AAGGAAAGCG GCCGCAACGC AATCTGTTTC TTCGACCCGG CGATGCAGAC GGTCGTGATG GAGCGCGCCG CGCTCGAAGC AGCGTTGCGC CGCGCAATCG ACGAAGACCA GCTGCTGGTG CACTACCAGG CGCAGGTGCT CAATGGCAAC CGCGTGACGG GCGCGGAGGC GCTGGTGCGC TGGCAGCATC CGCAGCATGG ACTCGTGCCG CCCGCCGAGT TCATCCCGCT CGCCGAAGAG ACGGGGCTGA TCCTCGCGCT CGGCGACCGG GTGCTCGACA CGGCGTGCCG GCAGCTCGCG CAATGGTCGT TGCGCCCGGA CCGTGCGCAT CTGTCGATTG CCGTCAACGT GAGCGCGCAA CAGCTTCGCG AGAACAGCTT CGTGACCAGC GTGCTCGAGG CGCTGGCGCG CACGGGCGCC GATCCGAGCC GTCTGAAGCT CGAACTGACG GAGAGCGTGC TGGTCGACAA CGTCGAGGAC ATCATTCGCA AGATGACGCT GCTGCGCACC AAGGGCGTGG TCTTTTCGCT CGACGACTTC GGCGTCGGCT ACTCGTCGCT GTCGTATCTG AAGCGCTTGC CGCTTGGGCA ATTGAAGATC GACAGGTCGT TCGTGCGCGA TGTGCTCGAC GATCCGAACG ACGCCGTGAT CGCGCGCGCG ATCGTCGCGC TCGCGCAAAG TCTTGGGCTT GGCGTGATTG CCGAGGGCGT CGAGACGCAG GCGCAACGGC AGTTCCTCGC CGACGCCGGG TGCCACGCAT ACCAAGGCTA TCTGTTCTGC CGGCCGCTGC CGATCGAAGA CTTCGAGGCG TTCGCCGATA CATTCGATTC GCGGGAGTCG GCGCTCGAAA CGCCCTGA
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Protein sequence | MSRARLVLLP LVILLTGLTI TWSVWDHERQ AVRRELLSEF NFALGDAVSR VEQRMATYEQ MLRGVQGMFA ARGSLDLDAF HGYIGAVNAD SSVAGMQALG VVQWVSAQRH DAHLAEMNRR IGRRYAIRPP GVRDGYAPVV AREPVYADPN AVLGYDTWSS PVRRQALEKS RDSGLAVVSG KVQLASDSDA QPVAGFVMYL PVYERGAPQD TVDERRAHLL GWVYAAFRMR DVLASLYGDQ PAGLYLSIYD GTQPSAESLL YRSSEPKLRD VVSANEYLVV GGHDWTLSMT AQPDFKARFG HNAKLLIACT GAGLSLLLAL LAWSLASGRS RAMRLASKMT AEVRESEAEL RIAAVAFDSL EGMMVTDADG TILRVNSAFT KCTGYTADDV IGRNPRLLSS GRHDAAFFRD MWETIHRVGG WQGEIWDRRK NGEIYPKWLT ITAVKAVDGN VTHYVGTHYD ITERKLAEEQ IKELAFFDAL THLPNRTLLR DRLKQVIALS AQNHTHGALL FVDLDNFKTL NDTLGHDKGD LLLGQVAVRL LGSVREGDTV ARMGGDEFVI VLSDLSRNRD EAASETEGAA EKVLTALSRP YYLAGTEFRT TASIGATLFT GHETSIDELL KQSDLAMYKS KESGRNAICF FDPAMQTVVM ERAALEAALR RAIDEDQLLV HYQAQVLNGN RVTGAEALVR WQHPQHGLVP PAEFIPLAEE TGLILALGDR VLDTACRQLA QWSLRPDRAH LSIAVNVSAQ QLRENSFVTS VLEALARTGA DPSRLKLELT ESVLVDNVED IIRKMTLLRT KGVVFSLDDF GVGYSSLSYL KRLPLGQLKI DRSFVRDVLD DPNDAVIARA IVALAQSLGL GVIAEGVETQ AQRQFLADAG CHAYQGYLFC RPLPIEDFEA FADTFDSRES ALETP
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