Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3712 |
Symbol | |
ID | 6245254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 661899 |
End bp | 663251 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595482 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001859893 |
Protein GI | 186472551 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.40893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTCG CATACCTCGC GCGCCTTTGC ACGGCGGTTT TCCTGCGAGC GCTGTTGCAG CGCAAACGGG ATACCCGGCG GAGCCAACGC CGGCGAGGCA CGGCGCTATA CTGTGTGCCC GTCTCTATCC GACGACATAA CAAATTGGCA GATCACGATC TGAAGCGGCT GAAAATCGAC CGGCCCGCCG TCGCCACGGG CGGCCGCCGG CGTAACTGGA TCGGCTACGG GGCCGTCGCG CTGATCGTCA TCGGCGCGCT CGTCTTCGGG CTCCGGCTCG CCGGGCCGCA ATCCGTCGAG ACCACGACCG TCGTCTCGGC CTATCCTTCG CAAACCTACA CGCTGCTCAA CGCGACAGGC TACGTCGTGC CCCAGCGAAA GGCCGCCGTT GCGTCAAAGG CGCAAGGGCG GCTGGAATGG CTCGGCGTGC TGGAAGGCAC GCGCGTCAAG AAAGACGAAG TGATCGCGCG CATCGAGAGC GCGGATGTGT CGGCGTCGCT CGCGCAGGCG AAGGCGCAGG TCAAGGTCGC GCAAGCGAAC CTTGCGCTGC AGCAGGCCGA ACTGAAGAAC GCCGAAATCA ATCTGCGCCG CTCGAAGATT CTCGCGCCGA ACGGCGCAAT TCCTGCGACG CAGTACGACG CCGATCTCGC GCGCTACGAC AAGGCGGTCG CCTCGATCGA CAACAGCCGA GCCGCGATCG TGTCCGCACA GGCGAATGCG CAGGCTGCGC AGGTCGCCGT CGATCAGACC GTGATCCGCG CGCCTTTCGA CGGCGTCGTG ATCGAGAAAC ACGCGAACGT CGGCGACAAC ATCACGCCGT TTTCGCAGGC GTCGGACAGT AAAGGCGCCG TCGTGACAAT CGCCGACATG GACACGCTGG AAGTCGAAGC CGACGTCGCG GAATCGAACA TCGCGAAGAT TGCCGTGAAC GCGCCGTGCG AGATCCAGCT CGACGCGCTA CCCAACGTGC GCCTCGCGGG CAGTGTGTCG CGCATCGTGC CGACCGTCGA CCGCTCGAAG GCGACCGTGC TCGTCAAGGT GCGTTTCGTC GATCATGACG CTCGCGTGCT GCCCGACATG AGCGCAAAGA TCGCGTTCCT GTCGAAGCCG GTGCCGCCTG AAGACCGCAA GCCGGTCGTG GCCGTGCAGC CGGCCGCCAT TGTCGAGCGC AATGGCCGCA AGGTCGTGTT CGTCGTCAAG GACGACACCG CGCGCGAAGT CCCTGTCACG ACGGCGCAGA CGCTCGGCGA ACTGGTCGCG GTCAGCGGCG TGCGTCCCGG CGACGTGCTG GTGCGTGCGC CGAACGAGCA CATCAAGGAC GGCGCCAAGG TCTCCGTGGC GAAGAAACAG TGA
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Protein sequence | MPFAYLARLC TAVFLRALLQ RKRDTRRSQR RRGTALYCVP VSIRRHNKLA DHDLKRLKID RPAVATGGRR RNWIGYGAVA LIVIGALVFG LRLAGPQSVE TTTVVSAYPS QTYTLLNATG YVVPQRKAAV ASKAQGRLEW LGVLEGTRVK KDEVIARIES ADVSASLAQA KAQVKVAQAN LALQQAELKN AEINLRRSKI LAPNGAIPAT QYDADLARYD KAVASIDNSR AAIVSAQANA QAAQVAVDQT VIRAPFDGVV IEKHANVGDN ITPFSQASDS KGAVVTIADM DTLEVEADVA ESNIAKIAVN APCEIQLDAL PNVRLAGSVS RIVPTVDRSK ATVLVKVRFV DHDARVLPDM SAKIAFLSKP VPPEDRKPVV AVQPAAIVER NGRKVVFVVK DDTAREVPVT TAQTLGELVA VSGVRPGDVL VRAPNEHIKD GAKVSVAKKQ
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