| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3709 |
|---|
| Symbol | |
|---|
| ID | 6245251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 658828 |
|---|
| End bp | 659994 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595479 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001859890 |
|---|
| Protein GI | 186472548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.392463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.872596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAATTC CGCTCTCGTA CATCGCCCGC AACCTGTGGA CCCGCCGTCT GACCACGGCG
CTCACGGCGG GCGGCCTCGC GCTGGTGGTG TTCGTATTCG CGACGGTGCT GATGCTCGAC
GCCGGTCTCA AGAAGACGCT GGTCTCGACG GGCGAGCAGG ACAATGTCGT CGTGATCCGC
AAAGGCGCGG AAACAGAAGT GCAAAGCGCG ATCGACCGCG GACAGGCCAA CGTGATCGAA
ATGCATCCGG CCGTCGCGAT GGGCGCAGGC GGGATGCGGA TGGCGTCGAA AGAATCCGTC
GTGCTGATCT CATTGCTGAA GCTCGGCACG GGCAAGCCGT CGAACGTCGT GATCCGCGGC
GTGTCGCCTG CGGGCATGAG CTTGCGGCCG CAGGTGAAGC TCGCGTCGGG ACGCATGTTC
AGTCCCGGCT CGTCGGAGAT CGTGGTCGGC AGCAGCATCG CAAAGGGTTT CGGCGGCACG
CAGCTGGGCG AGCACCTACA TTTCGCGCAG CGCGACTGGA CCGTGGTCGG CACTTTCGAT
GCGGGCGGCA GCGGCTTCGA TTCGGAAATC TGGGGCGATG TCGATCAGCT GATGCAGTCG
TTCCGGCGCA CCAGCTATTC GTCGATGGTG GTGCGTCTTG CGCAGTCCGA CCAGTTCGAG
CAGTTCCGTG CCGATCTCGA CGTCGATCCG CGCCTCGCGG AAGAAGCAAA GCGCGAGCAG
ACCTTCTACA GCGACCAGTC GAAGGCGCTG TCGAGCTTCC TCAATATTCT CGGCATCACC
CTGTCGACGA TTTTTTCGAT TGCCGCGATG ATCGGCGCGA TGATCACGAT GTACGCGTCG
GTCGCCAATC GCGTCGCGGA AATCGGCACG TTGCGCGCGC TCGGCTTCCA GCGCGCGAAC
GTACTGGCCG CGTTTCTGGT CGAGGCGATG CTGCTGGGGC TGGTCGGCGG GCTGGCGGGC
CTGGGCTGCG CGGCGTTCAT GCAGTTCGCG TCGTTTTCCA CGACGAACTT CCAGACCTTC
GCGGACCTGT CGTTCCGCTT CGTGCTCACC CCGTCGATCG TCGTGAAGAC GCTGCTATTT
GCGATGACGA TGGGGCTCGT CGGCGGCTTT CTGCCCGCGA TGCGCGCGGC GCGGATGAAT
ATCGTGGACG CGTTGCGCGC GCGCTGA
|
|---|
| Protein sequence | MAIPLSYIAR NLWTRRLTTA LTAGGLALVV FVFATVLMLD AGLKKTLVST GEQDNVVVIR
KGAETEVQSA IDRGQANVIE MHPAVAMGAG GMRMASKESV VLISLLKLGT GKPSNVVIRG
VSPAGMSLRP QVKLASGRMF SPGSSEIVVG SSIAKGFGGT QLGEHLHFAQ RDWTVVGTFD
AGGSGFDSEI WGDVDQLMQS FRRTSYSSMV VRLAQSDQFE QFRADLDVDP RLAEEAKREQ
TFYSDQSKAL SSFLNILGIT LSTIFSIAAM IGAMITMYAS VANRVAEIGT LRALGFQRAN
VLAAFLVEAM LLGLVGGLAG LGCAAFMQFA SFSTTNFQTF ADLSFRFVLT PSIVVKTLLF
AMTMGLVGGF LPAMRAARMN IVDALRAR
|
|---|
| |