| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3700 |
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| Symbol | |
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| ID | 6245242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 649764 |
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| End bp | 652106 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642595470 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001859881 |
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| Protein GI | 186472539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.973532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCT CCCCGACGGA ACAGACGTCC GACGCCGGAT TTAGAAGCCG GTTTCACCGA
CGTTCGCTGG AACACCAGCG CCCCCTTTCT ACCGTGACGA TGGCGTTTAC CGTCGTCGCC
TTCATCATTT TCGTGTGTGC GCGCAGCCTC GTCGCGGGAC CGGCTGTGCC GCTCGTATGG
CGGCTGGCGT GCGCGCTCGT CCTTGCGTTG CTGGTCGCCG CGATTCCGCG CACGCGGCGG
ATCTGGGTCT TCGGCGGCAT TGGTGTTGCG TACACCCTCG TGCTGCTGGC GGGGCTCGCG
GTCAACGTCG CCGGACTCGA CGAGCCGCTG CTGTGGGCGT TGCCCGCGAT AGTCGTGGTT
TCCGTCTGCG CCGCACCATT GTGGCTGACG CCGGCGCACT TCTGCATCGG CACTGCACTG
TTTTACGCGG CGGGCACGCC GTTTTTGCTG AGCCTGCCGC ATCCGCACGG CGACGTCAGC
GTCGTGTGCT GGATGTGGGT CCTGATCGCG TTGCCGACGG CAGCAGTGTT TCACTTCGGC
TTCTACGGGC TCCGCCGCAA TCACTTTTTG CTCGAAGACC GGCTCGCGCG CCTCGCCGCC
ACCGATCCGC TGACTGGCCT GCAAAACCGC CGGGCGTTTC TGGAGCAGGC GGCGCTGCGT
TTGTCGTCGC TGGACCCCGG AGCGAAGACG AGCGCGATTT TTCTCGACAT CGACTATTTC
AAGTCGCTCA ACGACCAGTT CGGGCATGCC GTCGGCGATC AGGCGCTGTC GGACGTGGCG
CGCGTGCTGA AGGAGATGAC GGGGGCGGGA GATATCGTGA GCCGTATCGG CGGCGAAGAA
TTCGCGCTGT TGCACGGCGC GGCGCTGCGT CCCGCTGTGC AACTCGCCGA AACGCTGCGC
GCGGCGATCG GGCGCATTGC GCGGCCGGAT GGGCAGTTGG GTGCGAGCTT CGGCGTCGCG
GAATACCGGC CGGGCGAGAG CGTGATGGCC CTGCTCGACC GCGCGGACGA AGCGCTTCTG
CGCGCGAAGT ATTCGGGGCG CAACCGCGTG TGCGCAGAGC GCGCGACGCT CGTCGACCCC
GTGCGTCTCG CCAGGACGCA CGACGACGCG GACGGCGCGG CATCGCAGCC GGTGCGTCAG
CAGTGGGACG ATTTCTGGCT GACCTCGCAT TTCCAGCCGC TTTACAGCCT CTCGCACCAG
AAGCAGGTCG GCTTCGAGGC GCTGTTGCGC GGCGAGCGCG AGGACGGCGC GCAGGTGCCG
CCCGCCGTGC TGTTTTCGCC GAAGCCGTTC ACCGATCAGG GCGAACTGGA CCGCGTGAGT
CACGCGCTGC ACCTCGGCAA TGCGCGCCGC CTGATTCCCG ACGATGCATG GGTGTTCCTG
AACATTCTGC CATCGACATT CGTCGCCGAC GGCTACCCCG ATCAGCTCGC GCAGATCGCG
CGTTCAGCGG GAATTTCCGC AGGGCGCGTA GTGCTCGAAC TGCTGGAGTC GCACGGCGGC
AGCGTCGACG AGATGTCGCG TGTGGCTAGC CAGTATCGCG ACCACGGCTT CCTGATCGCC
GTTGACGATT TCGGTGCAGG GCATTCGAAT CTCGATCGTC TGCTGCGCAT CCGGCCCGAT
CTGGTCAAGC TGGACGGCGA GCTGATTCGC GCGAAGAGCC ACGGCGCGGA CCAGCCCATT
TTGCCGAAGC TGGTGTCGTT GCTGCACCAG GCGGGGATGC TCGTGGTCGT CGAAGGCGTC
GAGACGACGG AGCAGCTGAT CCTCGCGGTC GAATCGAACG TCGATTTCGC ACAGGGCTTT
CTGCTGGGCC GTCCGGCGCC GTCCATCACG CCGCCCGATG CCGTGCACCG GCGCATCGAT
CATGCGTTCG ATGTGATCGC GGAGGGGCGT GCGCATCAGC ATGCCTTGTT CGAATCGGAA
GTGCGTCCCT ACCGGCAGGC GCTCGATGCA GGCGTCGATG CATGGCTGAA GGGCACGCCG
CTGAAGGATG CGTTCTACGA TCTCGCGCAG CTGGAACTCT GTATCAGCTG TTTCGTGCTC
GACGATGCGG GGCGGCAGAT CGGGCACGAA TTGCCGGGCA AGGCATCGGC GATCGACGGT
GGATCGCTGC ATCCCGTCGC GAATCCCCGG GACGCGCGCT GGGATCATCG GCCGTATTTC
CGCAATGCCG TGCTGAAGCC GGGCGTACCG ATCACGAGCA GCCCGTATCT GTCGCTCGCA
AGCGGCAGGC CGTGTATTGC CGTGACCGTC GCGTTGCAGT CGGAGGGCGG ACGCTGCGTG
GTCGGCGCGG AACTGGACTG GTCGCTGCAA AGGCTGCCCT GGCCGACGGC CGAGCATTGG
TGA
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| Protein sequence | MLFSPTEQTS DAGFRSRFHR RSLEHQRPLS TVTMAFTVVA FIIFVCARSL VAGPAVPLVW
RLACALVLAL LVAAIPRTRR IWVFGGIGVA YTLVLLAGLA VNVAGLDEPL LWALPAIVVV
SVCAAPLWLT PAHFCIGTAL FYAAGTPFLL SLPHPHGDVS VVCWMWVLIA LPTAAVFHFG
FYGLRRNHFL LEDRLARLAA TDPLTGLQNR RAFLEQAALR LSSLDPGAKT SAIFLDIDYF
KSLNDQFGHA VGDQALSDVA RVLKEMTGAG DIVSRIGGEE FALLHGAALR PAVQLAETLR
AAIGRIARPD GQLGASFGVA EYRPGESVMA LLDRADEALL RAKYSGRNRV CAERATLVDP
VRLARTHDDA DGAASQPVRQ QWDDFWLTSH FQPLYSLSHQ KQVGFEALLR GEREDGAQVP
PAVLFSPKPF TDQGELDRVS HALHLGNARR LIPDDAWVFL NILPSTFVAD GYPDQLAQIA
RSAGISAGRV VLELLESHGG SVDEMSRVAS QYRDHGFLIA VDDFGAGHSN LDRLLRIRPD
LVKLDGELIR AKSHGADQPI LPKLVSLLHQ AGMLVVVEGV ETTEQLILAV ESNVDFAQGF
LLGRPAPSIT PPDAVHRRID HAFDVIAEGR AHQHALFESE VRPYRQALDA GVDAWLKGTP
LKDAFYDLAQ LELCISCFVL DDAGRQIGHE LPGKASAIDG GSLHPVANPR DARWDHRPYF
RNAVLKPGVP ITSSPYLSLA SGRPCIAVTV ALQSEGGRCV VGAELDWSLQ RLPWPTAEHW
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